RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SSX4O60224 188 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF14P17017 642 aaPredicted RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SLC2A5P22732 501 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SOX18P35713 384 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 NR0B1P51843 470 aaKnown RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SORDQ00796 357 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SGCBQ16585 318 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 OCLNQ16625 522 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 TCTE1Q5JU00 501 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF546Q86UE3 836 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM156Q8N614 296 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 THRSPQ92748 146 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 FOXQ1Q9C009 403 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF436Q9C0F3 470 aaPredicted RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ENTPD2Q9Y5L3 495 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 TRDV1A0A1B0GX56 115 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF736B4DX44 427 aaPredicted RBP9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ALX3O95076 343 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 CSF3P09919 207 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 AMY2BP19961 511 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 MVDP53602 400 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SIRPAP78324 504 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 GPR176Q14439 515 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ZIC1Q15915 447 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 CHRFAM7AQ494W8 412 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 FAM27D1Q5T7N8 215 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 PXDC1Q5TGL8 231 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF425Q6IV72 752 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 FAHD1Q6P587 224 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ARSKQ6UWY0 536 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SHISA6Q6ZSJ9 500 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SFTPA2Q8IWL1 248 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 MFSD8Q8NHS3 518 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 MAFIPQ8WZ33 124 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SHDQ96IW2 340 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 PITX2Q99697 317 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SEC22CQ9BRL7 303 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 CDCP1Q9H5V8 836 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 HINT3Q9NQE9 182 aaKnown RBP9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SEMA4GQ9NTN9 838 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ABRACLQ9P1F3 81 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SPTY2D1-AS1A0A0U1RR47 76 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 A0A1W2PPC4 97 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 PRAF2O60831 178 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SCO1O75880 301 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 KCNK2O95069 426 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 HCCSP53701 268 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SNRPGP62308 76 aaKnown RBP9.2□□□□□ -0.94
TRAF1-202ENST00000540010 FOXK2Q01167 660 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SPOCK1Q08629 439 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ABI3BPQ7Z7G0 1075 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 TOR1AIP2Q8NFQ8 470 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 OR9A4Q8NGU2 314 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM106AQ96A25 262 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 OR2A14Q96R47 310 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SERINC2Q96SA4 455 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 GABARAPL3Q9BY60 117 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 PDE7BQ9NP56 450 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 CCDC88CQ9P219 2028 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ATG2AQ2TAZ0 1938 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 H0YGG7 62 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 HMGN4O00479 90 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 MPIG6BO95866 241 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 CPMP14384 443 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ARRB1P49407 418 aaPredicted RBP9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ARF3P61204 181 aaPredicted RBP9.2□□□□□ -0.94
TRAF1-202ENST00000540010 FABP5Q01469 135 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ELOCQ15369 112 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 ESCO2Q56NI9 601 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 KRBOX4Q5JUW0 171 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SLC18B1Q6NT16 456 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SLC48A1Q6P1K1 146 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 GDF7Q7Z4P5 450 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SLC22A18ASQ8N1D0 253 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 DDOQ99489 341 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 NOX4Q9NPH5 578 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 SLC2A4RGQ9NR83 387 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 NPAP1Q9NZP6 1156 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 CHST2Q9Y4C5 530 aa9.2□□□□□ -0.94
TRAF1-202ENST00000540010 A0A0J9YY10 115 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SLC16A7O60669 478 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 TBX19O60806 448 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 PCBP4P57723 403 aaKnown RBP9.19□□□□□ -0.94
TRAF1-202ENST00000540010 LTBQ06643 244 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 FGL1Q08830 312 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 FAM69AQ5T7M9 428 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 GSG1LQ6UXU4 331 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SSX6Q7RTT6 188 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 DPY19L4Q7Z388 723 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 TPRA1Q86W33 373 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 KLHL21Q9UJP4 597 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SERTAD3Q9UJW9 196 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 VDAC3Q9Y277 283 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 NAP1L6A6NFF2 107 aa9.19□□□□□ -0.94
TRAF1-202ENST00000540010 SDC3O75056 442 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms