RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 NPY1RP25929 384 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 CD1BP29016 333 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 CATR1Q13166 79 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 VASNQ6EMK4 673 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 RNF175Q8N4F7 328 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 DTD1Q8TEA8 209 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 MKRN2Q9H000 416 aaKnown RBP11.96□□□□□ -0.49
CACNB4-210ENST00000539935 DDX31Q9H8H2 851 aaKnown RBP11.96□□□□□ -0.49
CACNB4-210ENST00000539935 TMEM269A0A1B0GVZ9 245 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 SGK494L7N484 410 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 MMP12P39900 470 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 RELAQ04206 551 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 NDFIP1Q9BT67 221 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 HOXD12P35452 270 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 C18orf21Q32NC0 220 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-210ENST00000539935 MUCL1Q96DR8 90 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 SLC29A1Q99808 456 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 LIN7BQ9HAP6 207 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 SLC6A20Q9NP91 592 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 OLAHQ9NV23 265 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 SRPK3Q9UPE1 567 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 ZNF281Q9Y2X9 895 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 MEPCEQ7L2J0 689 aaKnown RBP11.96□□□□□ -0.49
CACNB4-210ENST00000539935 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 ACOT4Q8N9L9 421 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 SIMC1Q8NDZ2 872 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 OR5AR1Q8NGP9 310 aa11.96□□□□□ -0.49
CACNB4-210ENST00000539935 DCLRE1CQ96SD1 692 aaKnown RBP11.96□□□□□ -0.49
CACNB4-210ENST00000539935 ZNF638Q14966 1978 aaKnown RBP11.96□□□□□ -0.49
CACNB4-210ENST00000539935 PGGT1BP53609 377 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 BPIFB2Q8N4F0 458 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 GPR32O75388 356 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 HEXAP06865 529 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 EDN3P14138 238 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 CHRNEQ04844 493 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 RBPJQ06330 500 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 GAB1Q13480 694 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 PDZD3Q86UT5 571 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.5
CACNB4-210ENST00000539935 ELF4Q99607 663 aaPredicted RBP11.96□□□□□ -0.5
CACNB4-210ENST00000539935 GON7Q9BXV9 100 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 GORASP2Q9H8Y8 452 aa11.96□□□□□ -0.5
CACNB4-210ENST00000539935 A6NL46 340 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 AREGP15514 252 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 MLLT11Q13015 90 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 RAB27BO00194 218 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TNFRSF10AO00220 468 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 PPP3CBP16298 524 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 CDC34P49427 236 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 SRPXP78539 464 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 EBPQ15125 230 aaKnown RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ZMAT1Q5H9K5 638 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 SHARPINQ9H0F6 387 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 C1orf198Q9H425 327 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 IGSF5Q9NSI5 407 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 HEMK1Q9Y5R4 338 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 PIAS3Q9Y6X2 628 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TMEM82A0PJX8 343 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 BET1O15155 118 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 SLC16A7O60669 478 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 MOB3CQ70IA8 216 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ARNT2Q9HBZ2 717 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 AGPAT4Q9NRZ5 378 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ZDHHC7Q9NXF8 308 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 KDM4EB2RXH2 506 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 CDK4P11802 303 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 PSMB2P49721 201 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TMEM97Q5BJF2 176 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ZNF684Q5T5D7 378 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 MMP21Q8N119 569 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TMEM163Q8TC26 289 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ZNF778Q96MU6 729 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 S1PR3Q99500 378 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 NIT2Q9NQR4 276 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ZNF586Q9NXT0 402 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TUBAL3A6NHL2 446 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 PRAMEF26H0Y7S4 382 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 GYPBP06028 91 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TBCEQ15813 527 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 CDS1Q92903 461 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 PTRH2Q9Y3E5 179 aaKnown RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 C10orf71Q711Q0 1435 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TRAV27A0A087WT01 109 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 ZFP92A6NM28 416 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 TMEM212A6NML5 194 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 SOCS6O14544 535 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 FZD7O75084 574 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 LDB3O75112 727 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 GDF1P27539 372 aa11.95□□□□□ -0.5
CACNB4-210ENST00000539935 RALYQ9UKM9 306 aaKnown RBP11.95□□□□□ -0.5
CACNB4-210ENST00000539935 MCRIP1C9JLW8 97 aa11.94□□□□□ -0.5
CACNB4-210ENST00000539935 SSTR2P30874 369 aa11.94□□□□□ -0.5
CACNB4-210ENST00000539935 IDUAP35475 653 aa11.94□□□□□ -0.5
CACNB4-210ENST00000539935 TRA2BP62995 288 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms