RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 MSTNO14793 375 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 AP1G1O43747 822 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 KCNK2O95069 426 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 F13BP05160 661 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TACR3P29371 465 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 MTNR1BP49286 362 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 RAB11AP62491 216 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 GRB2P62993 217 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 RACK1P63244 317 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SRPXP78539 464 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CATR1Q13166 79 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SFRP5Q5T4F7 317 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ARRDC3Q96B67 414 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 PBX4Q9BYU1 374 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SLC19A3Q9BZV2 496 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TNFRSF10CO14798 259 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SURF4O15260 269 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SERPINA7P05543 415 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 F2RL1P55085 397 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SPOCK1Q08629 439 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CGB2Q6NT52 195 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TRNP1Q6NT89 227 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 WDR5BQ86VZ2 330 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 NKAIN3Q8N8D7 197 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 OR7G2Q8NG99 324 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 OR2T11Q8NH01 316 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 RAB3CQ96E17 227 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF582Q96NG8 517 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TSSK2Q96PF2 358 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 NMNAT2Q9BZQ4 307 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CCDC88CQ9P219 2028 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 A0A1W2PPH5 198 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 LRP5LA4QPB2 252 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CEBPZOSA8MTT3 80 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 HBE1P02100 147 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 KIAA1024LP59773 190 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SLC14A1Q13336 389 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CLEC14AQ86T13 490 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 C12orf45Q8N5I9 185 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 IL1F10Q8WWZ1 152 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 RBMXL1Q96E39 390 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 PLCXD1Q9NUJ7 323 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ASIC5Q9NY37 505 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 PCDHGA1Q9Y5H4 931 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 RGPD4Q7Z3J3 1758 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 EP400Q96L91 3159 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 A0A1B0GV50 99 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 MDFIC2A0A1B0GVS7 189 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CDC14CA4D256 554 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF587BE7ETH6 402 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 PPP6CO00743 305 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SLC34A2O95436 690 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 WNT11O96014 354 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 MT-ND4P03905 459 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CLDN6P56747 220 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 RELAQ04206 551 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 OR7E24Q6IFN5 339 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SLC48A1Q6P1K1 146 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 FBXW12Q6X9E4 464 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 COX15Q7KZN9 410 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TMEFF1Q8IYR6 380 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 BBS1Q8NFJ9 593 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 OR4D6Q8NGJ1 314 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SSX3Q99909 188 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SLAMF7Q9NQ25 335 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 THAP10Q9P2Z0 257 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 PCM1Q15154 2024 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TNRC6CQ9HCJ0 1690 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TMED7-TICAM2A0A0A6YYA0 188 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 C4orf47A7E2U8 309 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 C17orf112F2Z3M2 114 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 HLA-AP01891 365 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CDK4P11802 303 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 GABRB3P28472 473 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 PTPN6P29350 595 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SSTR4P31391 388 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF133P52736 654 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CSNK1G2P78368 415 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 MAT1AQ00266 395 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SELPLGQ14242 412 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TMEM176BQ3YBM2 270 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 YIF1BQ5BJH7 314 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 OR6V1Q8N148 313 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 CLDN22Q8N7P3 220 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ANKRD9Q96BM1 317 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 UBL7Q96S82 380 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TRAPPC2LQ9UL33 140 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TMED7Q9Y3B3 224 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 THBS1P07996 1170 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 FCGR2AP12318 317 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 NAGAP17050 411 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 TNK1Q13470 666 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ALKBH1Q13686 389 aaKnown RBP6.01□□□□□ -1.45
LSAMP-207ENST00000539563 MBTPS1Q14703 1052 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ZNF674Q2M3X9 581 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 LSMEM2Q8N112 164 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 ISL2Q96A47 359 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 SLC35A4Q96G79 324 aa6.01□□□□□ -1.45
LSAMP-207ENST00000539563 NUDT22Q9BRQ3 303 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms