RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	ARL13A	Q5H913	290 aa	Predicted RBP	5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	TECRL	Q5HYJ1	363 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	SH2D4B	Q5SQS7	431 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	C10orf25	Q5T742	122 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	SLC22A25	Q6T423	547 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	TMEM107	Q6UX40	140 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	DEF8	Q6ZN54	512 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	FCRLA	Q7L513	359 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	KCTD20	Q7Z5Y7	419 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	MISP	Q8IVT2	679 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	SLC43A2	Q8N370	569 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	PTGR2	Q8N8N7	351 aa	Predicted RBP	5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	NRAC	Q8N912	160 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	OR4F6	Q8NGB9	312 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	OR4C3	Q8NH37	302 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	FAM110B	Q8TC76	370 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	SELENOM	Q8WWX9	145 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	ATP6V1E2	Q96A05	226 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	EXOSC8	Q96B26	276 aa	Known RBP	5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	REXO5	Q96IC2	774 aa	Known RBP	5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	KLHDC3	Q9BQ90	382 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	PIMREG	Q9BSJ6	248 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	PFDN4	Q9NQP4	134 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	GIMAP4	Q9NUV9	329 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	NMRK1	Q9NWW6	199 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	TAS2R7	Q9NYW3	318 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	KLHL9	Q9P2J3	617 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	VPS29	Q9UBQ0	182 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF225	Q9UK10	706 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	POU2F3	Q9UKI9	436 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	SNX6	Q9UNH7	406 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	PPP2R2C	Q9Y2T4	447 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	SLC25A15	Q9Y619	301 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412	FKBP7	Q9Y680	259 aa		5.26	□□□□□ -1.57
PICALM-223	ENST00000534412		A0A0G2JK05	382 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412		A0A1W2PQD3	144 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	TMEM89	A2RUT3	159 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	SERINC4	A6NH21	518 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	AQP7P3	A6NL99	342 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	GJE1	A6NN92	205 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF724	A8MTY0	619 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	FAM157A	C9JC47	383 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	TPD52L2	O43399	206 aa	Known RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	SPRY2	O43597	315 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	PCDH7	O60245	1069 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	INMT	O95050	263 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	NKX2-2	O95096	273 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	VENTX	O95231	258 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	OXSR1	O95747	527 aa	Predicted RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	OTC	P00480	354 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	TACSTD2	P09758	323 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	TNFSF4	P23510	183 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	LCN1	P31025	176 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	SFTPD	P35247	375 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	FABP6	P51161	128 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	NCBP2	P52298	156 aa	Known RBP eCLIP	5.25	□□□□□ -1.57	8e-30	■■□□□ 11.5
PICALM-223	ENST00000534412	CHRNB3	Q05901	458 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	FOXF1	Q12946	379 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	NAB1	Q13506	487 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNHIT3	Q15649	155 aa	Predicted RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	CD226	Q15762	336 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	GLE1	Q53GS7	698 aa	Known RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	SPIN4	Q56A73	249 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	AWAT1	Q58HT5	328 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	SGO1	Q5FBB7	561 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	KLC3	Q6P597	504 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	KLHL17	Q6TDP4	642 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	C3orf62	Q6ZUJ4	267 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	CTAGE3P	Q8IX95	158 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF540	Q8NDQ6	660 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ZFP90	Q8TF47	636 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF75CP	Q92670	426 aa	Predicted RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	NMD3	Q96D46	503 aa	Known RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ELP4	Q96EB1	424 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	SIGLEC11	Q96RL6	698 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ACPT	Q9BZG2	426 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	BPESC1	Q9GZL8	116 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	C3orf14	Q9HBI5	128 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	MYNN	Q9NPC7	610 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	DDX18	Q9NVP1	670 aa	Known RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	CPSF2	Q9P2I0	782 aa	Known RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	MALT1	Q9UDY8	824 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	GRID1	Q9ULK0	1009 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	TMCO1	Q9UM00	188 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	YLPM1	P49750	1951 aa	Known RBP	5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	ALPK2	Q86TB3	2170 aa		5.25	□□□□□ -1.57
PICALM-223	ENST00000534412	IGKV3D-15	A0A087WSY6	115 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412		A0A096LPK6	155 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	GNG14	A0A1W2PPG7	69 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	GXYLT2	A0PJZ3	443 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	PDLIM1	O00151	329 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	RAB27B	O00194	218 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	CYTIP	O60759	359 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	RAD51D	O75771	328 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	GIF	P27352	417 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	TIA1	P31483	386 aa	Known RBP eCLIP	5.24	□□□□□ -1.57	3e-6	■■□□□ 14.4
PICALM-223	ENST00000534412	STX2	P32856	288 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms