RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 HLA-DMAP28067 261 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 HTR2CP28335 458 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 VASPP50552 380 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 BTG1P62324 171 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 RPS25P62851 125 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 GPLD1P80108 840 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 POU3F1Q03052 451 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 POU4F3Q15319 338 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 BATFQ16520 125 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 TMEM52BQ4KMG9 183 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 SLC22A6Q4U2R8 563 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 CCNJQ5T5M9 372 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 PLCXD3Q63HM9 321 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 LYPD4Q6UWN0 246 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 BOLLQ8N9W6 283 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 OR4D10Q8NGI6 311 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 ABHD4Q8TB40 342 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 NPRL2Q8WTW4 380 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 MICU1Q9BPX6 476 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 ULBP2Q9BZM5 246 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 SLC19A3Q9BZV2 496 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 LMAN1LQ9HAT1 526 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 FAM212BQ9NTI7 297 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 HCFC1R1Q9NWW0 138 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 EHFQ9NZC4 300 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 TAAR2Q9P1P5 351 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 NDRG3Q9UGV2 375 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 BOKQ9UMX3 212 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 A0A0U1RQS6 177 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 NUPL2O15504 423 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 SLC35E2P0CK97 266 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 CD38P28907 300 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 SPOCK1Q08629 439 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 BAMBIQ13145 260 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 DYRK1AQ13627 763 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 OR7E24Q6IFN5 339 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 TMEM64Q6YI46 380 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 MEX3BQ6ZN04 569 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 NDUFAF7Q7L592 441 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 SSX7Q7RTT5 188 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 C19orf47Q8N9M1 422 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 TOE1Q96GM8 510 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 SLC46A1Q96NT5 459 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 TSSK2Q96PF2 358 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 CMSS1Q9BQ75 279 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 VN1R3Q9BXE9 311 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 NAA50Q9GZZ1 169 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 NXT1Q9UKK6 140 aaKnown RBP6.51□□□□□ -1.37
CTNND1-236ENST00000533667 PCDHGA6Q9Y5G7 932 aa6.51□□□□□ -1.37
CTNND1-236ENST00000533667 OR2A25A4D2G3 310 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 LRIT2A6NDA9 550 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 ARGFXA6NJG6 315 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 NUDT21O43809 227 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 RAD1O60671 282 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 SDC3O75056 442 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 KCNK2O95069 426 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 TMEM11P17152 192 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 PSMB5P28074 263 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 SLC35A1P78382 337 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 HTD2P86397 168 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 SRYQ05066 204 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 CATR1Q13166 79 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 SLC14A1Q13336 389 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 OPCMLQ14982 345 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 STEAP3Q658P3 488 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 FAM71E1Q6IPT2 247 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 GHSRQ92847 366 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 RBPMSQ93062 196 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 AMDHD1Q96NU7 426 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 SLC25A21Q9BQT8 299 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 CNTNAP3Q9BZ76 1288 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 METTL17Q9H7H0 456 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 NOX4Q9NPH5 578 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 OBP2AQ9NY56 170 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 MYOTQ9UBF9 498 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 DNAJB11Q9UBS4 358 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 PTRH2Q9Y3E5 179 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 TRBV11-1A0A0K0K1C0 115 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 A0A1W2PPV4 95 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 TMEM129A0AVI4 362 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 FAM227AF5H4B4 570 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 CSO75390 466 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 TM4SF4P48230 202 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 CLDN2P57739 230 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 MAT1AQ00266 395 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 TNK1Q13470 666 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 RBM39Q14498 530 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 LEXMQ3ZCV2 418 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 SLC48A1Q6P1K1 146 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 KCNIP4Q6PIL6 250 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 TAS1R1Q7RTX1 841 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 PPP1R3BQ86XI6 285 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 RDH10Q8IZV5 341 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 OR9K2Q8NGE7 335 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 OLIG1Q8TAK6 271 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 PAQR8Q8TEZ7 354 aa6.5□□□□□ -1.37
CTNND1-236ENST00000533667 RPL3LQ92901 407 aaKnown RBP6.5□□□□□ -1.37
CTNND1-236ENST00000533667 ZNF566Q969W8 418 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms