RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SLC41A3Q96GZ6 507 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 NSRP1Q9H0G5 558 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 EFCAB1Q9HAE3 211 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 B3GAT1Q9P2W7 334 aa23.18■■□□□ 1.3
TSPAN4-217ENST00000527644 KRT33AO76009 404 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 BGLAPP02818 100 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 SELENOPP49908 381 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 LTBQ06643 244 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 BSPH1Q075Z2 132 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 C9orf135Q5VTT2 229 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 NIPAL3Q6P499 406 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 TGIF2LYQ8IUE0 185 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 C17orf78Q8N4C9 275 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 ZNF611Q8N823 705 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 SCAIQ8N9R8 606 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 OR52N5Q8NH56 324 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 AKAP1Q92667 903 aaKnown RBP eCLIP23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 HOPXQ9BPY8 73 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 SLC25A15Q9Y619 301 aa23.17■■□□□ 1.3
TSPAN4-217ENST00000527644 DSCAMO60469 2012 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 TRAPPC13A5PLN9 417 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 CLOCKO15516 846 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 CBLP22681 906 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 LSP1P33241 339 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 CLDN17P56750 224 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 C1DQ13901 141 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 C1QTNF12Q5T7M4 302 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 TREML1Q86YW5 311 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 MICU2Q8IYU8 434 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 MPP4Q96JB8 637 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 ASPNQ9BXN1 380 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 CMTM6Q9NX76 183 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 RCE1Q9Y256 329 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 SH3GLB1Q9Y371 365 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 MED13LQ71F56 2210 aa23.16■■□□□ 1.3
TSPAN4-217ENST00000527644 ELOVL7A1L3X0 281 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 SMPD2O60906 423 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 LYPD3O95274 346 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 THY1P04216 161 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 NQO1P15559 274 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 KDELR2P33947 212 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 CPLX4Q7Z7G2 160 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 CARM1Q86X55 608 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 SLC15A3Q8IY34 581 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 LRRC75A-AS1Q8N1F1 130 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 C10orf53Q8N6V4 93 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 LILRB1Q8NHL6 650 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 LINC00470Q9BZP3 86 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 FAM107BQ9H098 131 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 MYLK2Q9H1R3 596 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 MRPL39Q9NYK5 338 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 NPAP1Q9NZP6 1156 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 SLC7A7Q9UM01 511 aa23.15■■□□□ 1.3
TSPAN4-217ENST00000527644 GMNCA6NCL1 334 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF587BE7ETH6 402 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 MS4A18H0YCH9 400 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 SNX3O60493 162 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF432O94892 652 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 MT-ATP6P00846 226 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 PTNP21246 168 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 DRD4P21917 467 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 HOXC12P31275 282 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 ADAM8P78325 824 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 IL1RL1Q01638 556 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 MS4A18Q3C1V0 323 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 TTC33Q6PID6 262 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 KLHL17Q6TDP4 642 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 HACD2Q6Y1H2 254 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 WDR88Q6ZMY6 472 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 TSPYL5Q86VY4 417 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 WDR31Q8NA23 367 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 CMTM5Q96DZ9 223 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 BOD1Q96IK1 185 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 MOGAT1Q96PD6 335 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 SLC17A5Q9NRA2 495 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 AMDHD2Q9Y303 409 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 CADP27708 2225 aa23.14■■□□□ 1.29
TSPAN4-217ENST00000527644 A0A1W2PR80 420 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 AKAP8O43823 692 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 TMCC2O75069 709 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 NKX6-1P78426 367 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 PMS2P3Q13401 168 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF672Q499Z4 452 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 LRRC23Q53EV4 343 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 CYBRD1Q53TN4 286 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 TMEM108Q6UXF1 575 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 UEVLDQ8IX04 471 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 IGFBPL1Q8WX77 278 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 TMUB1Q9BVT8 246 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 SLC19A3Q9BZV2 496 aa23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 POLR2J2Q9GZM3 115 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 POLR2J3Q9H1A7 115 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-217ENST00000527644 SLC43A1O75387 559 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 UPK3AO75631 287 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 LIPEQ05469 1076 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 LGALS3BPQ08380 585 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 SHEQ5VZ18 495 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 C8orf82Q6P1X6 216 aaPredicted RBP23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 ANKK1Q8NFD2 765 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 TMEM171Q8WVE6 324 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms