RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TMIGD3P0DMS9 266 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 PRKACGP22612 351 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 CTSSP25774 331 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 GSSP48637 474 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 CASP6P55212 293 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 TFF3Q07654 80 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 RASGEF1BQ0VAM2 473 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 POU4F3Q15319 338 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 ATP6AP1Q15904 470 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 MICAQ29983 383 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 FGD3Q5JSP0 725 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 PGBD2Q6P3X8 592 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF730Q6ZMV8 503 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 FAM214BQ7L5A3 538 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 AMIGO2Q86SJ2 522 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 MRGPRGQ86SM5 289 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 SCAIQ8N9R8 606 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 OR9Q2Q8NGE9 314 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 OR5J2Q8NH18 312 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 MOSPD2Q8NHP6 518 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 LRTOMTQ8WZ04 291 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 GMPPAQ96IJ6 420 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 FAM46AQ96IP4 442 aaKnown RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 ZFP3Q96NJ6 502 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 OXGR1Q96P68 337 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 SF3B5Q9BWJ5 86 aaKnown RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 TAPBPLQ9BX59 468 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 MCCC2Q9HCC0 563 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 GP6Q9HCN6 339 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 DNAJB9Q9UBS3 223 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF629Q9UEG4 869 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF229Q9UJW7 825 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 SIGLEC7Q9Y286 467 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 U3KQV3 271 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 USP9XQ93008 2570 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 HTR3EA5X5Y0 456 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 HSPB2A8KAH6 182 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 STAMBPO95630 424 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 HOXB6P17509 224 aaKnown RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 AGAP20933 346 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 OPRM1P35372 400 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 AQP2P41181 271 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 GPR4P46093 362 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 FOXG1P55316 489 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 SMIM11AP58511 58 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 RPL18Q07020 188 aaKnown RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 RNPS1Q15287 305 aaKnown RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 HSPB2Q16082 182 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 MAMDC2Q7Z304 686 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 KIF18BQ86Y91 864 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 FAM26EQ8N5C1 309 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF610Q8N9Z0 462 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 OR9K2Q8NGE7 335 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 OR13C2Q8NGS9 318 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 TMEM45BQ96B21 275 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 SDCCAG3Q96C92 435 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 RAB3IPQ96QF0 476 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 PKP2Q99959 881 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 NAA11Q9BSU3 229 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 KLHL4Q9C0H6 718 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 S100A14Q9HCY8 104 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 NANSQ9NR45 359 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 GLRX2Q9NS18 164 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 RASD1Q9Y272 281 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 HIF3AQ9Y2N7 669 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 SAMHD1Q9Y3Z3 626 aaKnown RBP9.55□□□□□ -0.88
NEDD8-205ENST00000527046 CORINQ9Y5Q5 1042 aa9.55□□□□□ -0.88
NEDD8-205ENST00000527046 FLNCQ14315 2725 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 TRAV27A0A087WT01 109 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 NKX2-6A6NCS4 301 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 A8MXE2 369 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 EFCAB9A8MZ26 197 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 C19orf84I3L1E1 186 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 VAMP5O95183 116 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 CLDN1O95832 211 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 IGFBP1P08833 259 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 FCGR2AP12318 317 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 IFNA8P32881 189 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 RUNX1T1Q06455 604 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 LGALS3BPQ08380 585 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 PMS2P3Q13401 168 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 MFSD13AQ14CX5 517 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 PHYHD1Q5SRE7 291 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 GTF2IRD2BQ6EKJ0 949 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 TMEM225Q6GV28 225 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 OR2A2Q6IF42 318 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 XKRXQ6PP77 449 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 TFAP2EQ6VUC0 442 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 C22orf34Q6ZV56 151 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 LINGO2Q7L985 606 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 P4HA3Q7Z4N8 544 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 PXKQ7Z7A4 578 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 GTF2IRD2Q86UP8 949 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF808Q8N4W9 903 aaPredicted RBP9.54□□□□□ -0.88
NEDD8-205ENST00000527046 ACBD4Q8NC06 268 aa9.54□□□□□ -0.88
NEDD8-205ENST00000527046 OR51A7Q8NH64 312 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms