RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 RAB3AP20336 220 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 HNF1AP20823 631 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 HNRNPA2B1P22626 353 aaKnown RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 S100PP25815 95 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CASP1P29466 404 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MPIP34949 423 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 OMPP47874 163 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 PSME3P61289 254 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 RPS27AP62979 156 aaKnown RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 NDPQ00604 133 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 TGM3Q08188 693 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 SIGLEC14Q08ET2 396 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MGAT3Q09327 533 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MERTKQ12866 999 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 STX5Q13190 355 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CEBPEQ15744 281 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ECSCRQ19T08 205 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 HNRNPA1L2Q32P51 320 aaKnown RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 CHRFAM7AQ494W8 412 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MPPE1Q53F39 396 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 NHSL2Q5HYW2 709 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 NHLRC3Q5JS37 347 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CELF3Q5SZQ8 465 aaKnown RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 ATAD3CQ5T2N8 411 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 DDI2Q5TDH0 399 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MEDAGQ5VYS4 303 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 PLPP4Q5VZY2 271 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 C1orf94Q6P1W5 598 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ZFP1Q6P2D0 407 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ZNF530Q6P9A1 599 aaPredicted RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 MFSD7Q6UXD7 560 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 WASH2PQ6VEQ5 465 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 LINC00696Q6ZRV3 163 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 TOM1L2Q6ZVM7 507 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 TMUB2Q71RG4 321 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 SPATA19Q7Z5L4 167 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 DPPA2Q7Z7J5 298 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 SERINC5Q86VE9 423 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ANKRD46Q86W74 232 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 METTL23Q86XA0 190 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 LRRC8AQ8IWT6 810 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 FAM71AQ8IYT1 594 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 LRRC18Q8N456 261 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 C11orf42Q8N5U0 333 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 TMEM104Q8NE00 496 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 C19orf18Q8NEA5 215 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CATSPER1Q8NEC5 780 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 BPIFCQ8NFQ6 507 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 OR5H6Q8NGV6 325 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 NDNFQ8TB73 568 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 LRRC20Q8TCA0 184 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MAGEE2Q8TD90 523 aaPredicted RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 ST7LQ8TDW4 575 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 AENQ8WTP8 325 aaKnown RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 MITD1Q8WV92 249 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 DNAJC9Q8WXX5 260 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 PHYHIPQ92561 330 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 UFD1Q92890 307 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MRGPRFQ96AM1 343 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 BPIFA2Q96DR5 249 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 SGTBQ96EQ0 304 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CCDC51Q96ER9 411 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 BSCL2Q96G97 398 aaPredicted RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 SAMD8Q96LT4 415 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 C12orf66Q96MD2 445 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MBOAT7Q96N66 472 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 BIRC8Q96P09 236 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CCT8L2Q96SF2 557 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 KCNK16Q96T55 309 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 KIFC1Q9BW19 673 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 CACNG6Q9BXT2 260 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ANGPTL4Q9BY76 406 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ACTR6Q9GZN1 396 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 TMEM117Q9H0C3 514 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 OR52A5Q9H2C5 316 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ASB7Q9H672 318 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 RANBP3Q9H6Z4 567 aaPredicted RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 XPNPEP1Q9NQW7 623 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ZNF302Q9NR11 478 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 RGS18Q9NS28 235 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 MS4A12Q9NXJ0 267 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 B4GALT7Q9UBV7 327 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 NAGKQ9UJ70 344 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 RAB23Q9ULC3 237 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ERVW-1Q9UQF0 538 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 KIF25-AS1Q9Y6Z4 181 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 GPATCH8Q9UKJ3 1502 aaKnown RBP2.96□□□□□ -1.94
CD44-217ENST00000525348 NUP155O75694 1391 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 ERVK-7P63135 1459 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 PRXQ9BXM0 1461 aa2.96□□□□□ -1.94
CD44-217ENST00000525348 NRKQ7Z2Y5 1582 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CHD4Q14839 1912 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MYOM1P52179 1685 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 HFM1A2PYH4 1435 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ATRNO75882 1429 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 A0A0G2JMP0 313 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 A0A0J9YYE9 177 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TRABD2BA6NFA1 517 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ANKDD1BA6NHY2 528 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms