RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 THEM4Q5T1C6 240 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 C1orf185Q5T7R7 199 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 OR7E24Q6IFN5 339 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 MEPCEQ7L2J0 689 aaKnown RBP4.68□□□□□ -1.66
PHF3-210ENST00000509876 ROBO4Q8WZ75 1007 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 HDAC2Q92769 488 aaKnown RBP4.68□□□□□ -1.66
PHF3-210ENST00000509876 TM4SF19Q96DZ7 209 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 TMEM41AQ96HV5 264 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 TNFRSF13CQ96RJ3 184 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 RLIMQ9NVW2 624 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 TRIOBPQ9H2D6 2365 aa4.68□□□□□ -1.66
PHF3-210ENST00000509876 TRBV4-1A0A0J9YWV2 114 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 A0A1W2PQD3 144 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ALG1L2C9J202 215 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 CYR61O00622 381 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 HSPA12AO43301 675 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 RGS9O75916 674 aaPredicted RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 ETV5P41161 510 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 RAD52P43351 418 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 PRKXP51817 358 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 GMFBP60983 142 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DDI2Q5TDH0 399 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TMEM244Q5VVB8 128 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 SSX8Q7RTT4 187 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 BTLAQ7Z6A9 289 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TMEM200AQ86VY9 491 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 MFSD8Q8NHS3 518 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 S100ZQ8WXG8 99 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ZNF583Q96ND8 569 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 VRK1Q99986 396 aaPredicted RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 C14orf119Q9NWQ9 140 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 MRPL39Q9NYK5 338 aaKnown RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 B3GAT1Q9P2W7 334 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 A0A1B0GW55 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 PRKNO60260 465 aaPredicted RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 DOK2O60496 412 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 FUCA1P04066 466 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 CD14P08571 375 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4L2P0CJ85 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4L3P0CJ86 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4L4P0CJ87 422 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4L5P0CJ88 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4L6P0CJ89 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4L7P0CJ90 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 RAB3AP20336 220 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 MSR1P21757 451 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 PAX7P23759 505 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ARHGDIBP52566 201 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ATP1B3P54709 279 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ZNF117Q03924 483 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ZNF846Q147U1 533 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 NKAPLQ5M9Q1 402 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 LIN54Q6MZP7 749 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 CGB2Q6NT52 195 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 SLC25A24Q6NUK1 477 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 CYB561A3Q8NBI2 242 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 GJC3Q8NFK1 279 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 PTPMT1Q8WUK0 201 aaPredicted RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 USB1Q9BQ65 265 aaKnown RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 TPK1Q9H3S4 243 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 NIPAL2Q9H841 368 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUX4Q9UBX2 424 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 PAIP2BQ9ULR5 123 aaKnown RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 H0YJX3 145 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 OR8G3PP0DMU2 310 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 BMP5P22003 454 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 PYCR1P32322 319 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 MAGEA5P43359 124 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 SOX2P48431 317 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 RAC1P63000 192 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TIAL1Q01085 375 aaKnown RBP eCLIP4.67□□□□□ -1.66
PHF3-210ENST00000509876 TUBA3CQ13748 450 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 KEAP1Q14145 624 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ST3GAL2Q16842 350 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TUBA3EQ6PEY2 450 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 FAM57BQ71RH2 274 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 STEAP2Q8NFT2 490 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 OR6T1Q8NGN1 323 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 FAM71F1Q96KD3 344 aaPredicted RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 SCGB3A2Q96PL1 93 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ALG12Q9BV10 488 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 SLC6A15Q9H2J7 730 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 EXOSC3Q9NQT5 275 aaKnown RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 FAM118AQ9NWS6 357 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ING3Q9NXR8 418 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TUBA8Q9NY65 449 aaPredicted RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 DUSP13Q9UII6 198 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 CNOT11Q9UKZ1 510 aaKnown RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 B3GNT3Q9Y2A9 372 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ST14Q9Y5Y6 855 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 IGHV3-9P01782 118 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TGFBR2P37173 567 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 GNG2P59768 71 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 FOXK2Q01167 660 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 ST3GAL4Q11206 333 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 TRIM16LQ309B1 348 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 MRM1Q6IN84 353 aaKnown RBP4.67□□□□□ -1.66
PHF3-210ENST00000509876 MOB3CQ70IA8 216 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 LINGO2Q7L985 606 aa4.67□□□□□ -1.66
PHF3-210ENST00000509876 SLCO6A1Q86UG4 719 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms