RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 IGFBP7Q16270 282 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 CARTPTQ16568 116 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 MAPK6Q16659 721 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 LIN9Q5TKA1 542 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 TWF2Q6IBS0 349 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 SLC39A4Q6P5W5 647 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 IFNEQ86WN2 208 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 RALGPS2Q86X27 583 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 HDDC3Q8N4P3 179 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 METTL13Q8N6R0 699 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 ARIH2OSQ8N7S6 290 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 SPATA13Q96N96 652 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 DDX47Q9H0S4 455 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 C8orf33Q9H7E9 229 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 CAB39LQ9H9S4 337 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 ZDHHC4Q9NPG8 344 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 NANSQ9NR45 359 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 RBM28Q9NW13 759 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 GALPQ9UBC7 116 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 TRIM10Q9UDY6 481 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 MED13Q9UHV7 2174 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 ZNF490Q9ULM2 529 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 PIN4Q9Y237 131 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 HES2Q9Y543 173 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 SLCO1B1Q9Y6L6 691 aa3.06□□□□□ -1.92
TOPBP1-206ENST00000508524 COL1A2P08123 1366 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 TRBV2A0A0J9YWF9 115 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 ARL5CA6NH57 179 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 DDX39AO00148 427 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 ZBTB5O15062 677 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 CHADO15335 359 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 HSF2BPO75031 334 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 ZCCHC18P0CG32 403 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 HLA-EP13747 358 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 RDXP35241 583 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 PSMD5Q16401 504 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 UBE2SQ16763 222 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 KCTD19Q17RG1 926 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 PVRIGQ6DKI7 326 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 FAM159AQ6UWV7 190 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 CD300LGQ6UXG3 332 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 ADAMTSL2Q86TH1 951 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 SKA3Q8IX90 412 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 ZNF786Q8N393 782 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 SUMF2Q8NBJ7 301 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 PIBF1Q8WXW3 757 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 RDH5Q92781 318 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 SNX21Q969T3 373 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 NACA2Q9H009 215 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 AZI2Q9H6S1 392 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 APMAPQ9HDC9 416 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 FANCFQ9NPI8 374 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 MMP26Q9NRE1 261 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 ADAM28Q9UKQ2 775 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 TDRKHQ9Y2W6 561 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 CDH10Q9Y6N8 788 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 PKD1L1Q8TDX9 2849 aa3.05□□□□□ -1.92
TOPBP1-206ENST00000508524 MED13LQ71F56 2210 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 NSD1Q96L73 2696 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 SMIM28A0A1B0GU29 152 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 I3L4J1 428 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 TRDMT1O14717 391 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 VEGFDO43915 354 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 HTR1EP28566 365 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 UGT1A5P35504 534 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 RPS10P46783 165 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 HTR5AP47898 357 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 ATXN3P54252 364 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 MYBPC1Q00872 1141 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 LASP1Q14847 261 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 LINC00303Q3SY05 128 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 IL23RQ5VWK5 629 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 LPCAT2Q7L5N7 544 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 H1FOOQ8IZA3 346 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 TSTD1Q8NFU3 115 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 OR2AP1Q8NGE2 309 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 URGCPQ8TCY9 931 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 ATP6V1E2Q96A05 226 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 LY9Q9HBG7 655 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 AGPAT5Q9NUQ2 364 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 BCAP29Q9UHQ4 241 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 CCL26Q9Y258 94 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 CACNG2Q9Y698 323 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 MEGF8Q7Z7M0 2845 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 NBEAL2Q6ZNJ1 2754 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 SDK2Q58EX2 2172 aa3.04□□□□□ -1.92
TOPBP1-206ENST00000508524 PLXND1Q9Y4D7 1925 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 MXRA5Q9NR99 2828 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 SVILO95425 2214 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 NFASCO94856 1347 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 PSMB11A5LHX3 300 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 ANKRD63C9JTQ0 380 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 SGK1O00141 431 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 RRP8O43159 456 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 ZBTB14O43829 449 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 TRIM3O75382 744 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 NDUFA7O95182 113 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 HTR1FP30939 366 aa3.03□□□□□ -1.92
TOPBP1-206ENST00000508524 GCKP35557 465 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms