RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ETS2P15036 469 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 TAGLN2P37802 199 aaKnown RBP2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 SULT1E1P49888 294 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 ERVK-25P63136 954 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 MRPL28Q13084 256 aaKnown RBP2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 DAZ2Q13117 558 aaKnown RBP2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 DGUOKQ16854 277 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 RABL6Q3YEC7 729 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 BOLA3Q53S33 107 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 CTSL3PQ5NE16 218 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 GPR157Q5UAW9 335 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 LRRC31Q6UY01 552 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF620Q6ZNG0 422 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 PAQR7Q86WK9 346 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 UBE2J2Q8N2K1 259 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 FANK1Q8TC84 345 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 PYROXD1Q8WU10 500 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 ARPC1AQ92747 370 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 FBXO32Q969P5 355 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 PANX2Q96RD6 677 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 MBOAT4Q96T53 435 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 CNN2Q99439 309 aaKnown RBP2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 FMO2Q99518 471 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 RASL11BQ9BPW5 248 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 ANKRD19PQ9H560 264 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 SIAEQ9HAT2 523 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 DAZ3Q9NR90 486 aaKnown RBP2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 QPCTLQ9NXS2 382 aa2.76□□□□□ -1.97
HMGB1P28-201ENST00000507778 KRTAP4-16G5E9R7 235 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 FAM189A1O60320 539 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF861PO60384 105 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 SNX4O95219 450 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 SERPINA3P01011 423 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 GIPP09681 153 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 SLC2A3P11169 496 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 ATP1B2P14415 290 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 HSD17B2P37059 387 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 CTRLP40313 264 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 ATP5IP56385 69 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 ACTR3P61158 418 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 C1orf94Q6P1W5 598 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 LRRC74BQ6ZQY2 392 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 NANOGNBQ7Z5D8 188 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF546Q86UE3 836 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 RALGPS2Q86X27 583 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 MFSD6LQ8IWD5 586 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 RNF175Q8N4F7 328 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 TPRX1Q8N7U7 411 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR1L6Q8NGR2 347 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 RNF138Q8WVD3 245 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 ACOT11Q8WXI4 607 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 NDRG1Q92597 394 aaKnown RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 N4BP2L2Q92802 583 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 MYDGFQ969H8 173 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 CYYR1Q96J86 154 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 PLEKHA8Q96JA3 519 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 FCRL1Q96LA6 429 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 NRTNQ99748 197 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 TMEM246Q9BRR3 403 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 PELOQ9BRX2 385 aaKnown RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 RIOK2Q9BVS4 552 aaKnown RBP2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 PKIBQ9C010 78 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR11A1Q9GZK7 315 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 LY9Q9HBG7 655 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 MMP26Q9NRE1 261 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 MMP17Q9ULZ9 603 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 PEX16Q9Y5Y5 336 aa2.75□□□□□ -1.97
HMGB1P28-201ENST00000507778 TP53BP1Q12888 1972 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 A0A0U1RQS6 177 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 A0A1W2PPE3 182 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 RBMY1BA6NDE4 496 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 RBMY1EA6NEQ0 496 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR7A10O76100 309 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 INSP01308 110 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 MMP1P03956 469 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 IGHV4-34P06331 123 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 RBMY1DP0C7P1 496 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 RBMY1A1P0DJD3 496 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 SLC2A5P22732 501 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 CCNE1P24864 410 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 NUDT1P36639 197 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 FDFT1P37268 417 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 TPMTP51580 245 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 SH3BGRP55822 239 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 CKAP4Q07065 602 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 BST1Q10588 318 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 PDIA2Q13087 525 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 GK3PQ14409 553 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF77Q15935 545 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 PRAMEF5Q5TYX0 476 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 PRAMEF6Q5VXH4 476 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 EGFL6Q8IUX8 553 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 PIANPQ8IYJ0 282 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 NECAB1Q8N987 351 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 CHRDL1Q9BU40 450 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 MFFQ9GZY8 342 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 NXF3Q9H4D5 531 aaKnown RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 RANBP3Q9H6Z4 567 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 NT5MQ9NPB1 228 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms