RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TSPAN12O95859 305 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 IGHV3-13P01766 116 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 LGALS2P05162 132 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 HOXD4P09016 255 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 LAMP1P11279 417 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 NCK1P16333 377 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 PTBP1P26599 531 aaKnown RBP eCLIP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 GCAP28676 217 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 YWHABP31946 246 aaKnown RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 NOVP48745 357 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 EFNA3P52797 238 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SEC61GP60059 68 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 BST1Q10588 318 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 CUL2Q13617 745 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 CFAP221Q4G0U5 840 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TCEAL5Q5H9L2 206 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TMEM31Q5JXX7 168 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 PDZK1Q5T2W1 519 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 GFI1BQ5VTD9 330 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ATL3Q6DD88 541 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 CCBE1Q6UXH8 406 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF497Q6ZNH5 498 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 Q6ZTC4 211 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 GPRIN3Q6ZVF9 776 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 UTS2BQ765I0 119 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SLC35F2Q8IXU6 374 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 MFSD9Q8NBP5 474 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 OR9K2Q8NGE7 335 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SLC2A14Q8TDB8 520 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TCTEX1D2Q8WW35 142 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TOMM40LQ969M1 308 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF689Q96CS4 500 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 C10orf35Q96D05 121 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 RASD2Q96D21 266 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 CNOT6LQ96LI5 555 aaKnown RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TCEANC2Q96MN5 208 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 MCCC1Q96RQ3 725 aaPredicted RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SLC35A5Q9BS91 424 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 TSSK1BQ9BXA7 367 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SPATA16Q9BXB7 569 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 RAB34Q9BZG1 259 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 RHBGQ9H310 441 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 GLIPR2Q9H4G4 154 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 SMYD3Q9H7B4 428 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 CAB39LQ9H9S4 337 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 GNB4Q9HAV0 340 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 PXMP2Q9NR77 195 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 CUTCQ9NTM9 273 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 DHRS4-AS1Q9P1J3 65 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 DPM3Q9P2X0 92 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 PRPF19Q9UMS4 504 aaKnown RBP2.53□□□□□ -2
TRAPPC11-205ENST00000506426 Q9Y3F1 56 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 NPTNQ9Y639 398 aa2.53□□□□□ -2
TRAPPC11-205ENST00000506426 HCFC1P51610 2035 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 MYO15AQ9UKN7 3530 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 MCM3APO60318 1980 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 TRANK1O15050 2925 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 TANC1Q9C0D5 1861 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 PLXNA1Q9UIW2 1896 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 BRWD1Q9NSI6 2320 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CNTNAP2Q9UHC6 1331 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 TRAV9-2A0A087WT02 112 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 A0A1B0GVL5 298 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 A0A1W2PPR1 153 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 GOLGA8OA6NCC3 632 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF716A6NP11 495 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 PP2D1A8MPX8 630 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 A8MX80 341 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 FAM220BPB1ANY3 271 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 RSPH10B2B2RC85 870 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 E9PBE3 544 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 GOLGA8NF8WBI6 632 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 FOXE1O00358 373 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 MED7O43513 233 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CYTH3O43739 400 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 WBP4O75554 376 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SCRG1O75711 98 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 RHBDL1O75783 438 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 VENTXO95231 258 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 AP2A1O95782 977 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 RSPH10BP0C881 870 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF735P0CB33 412 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SMIM10L2AP0DMW4 78 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SMIM10L2BP0DMW5 78 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 RNH1P13489 461 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 POLR2EP19388 210 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCNCP24863 283 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CD80P33681 288 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 MAGEA9P43362 315 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 XCR1P46094 333 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 FNTAP49354 379 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SUCLG1P53597 346 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 RPL32P62910 135 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 PLD1Q13393 1074 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CUL1Q13616 776 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 UBE2SQ16763 222 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CTSL3PQ5NE16 218 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 PRAMEF5Q5TYX0 476 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms