RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ZNF582Q96NG8 517 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 KATNB1Q9BVA0 655 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 NMNAT2Q9BZQ4 307 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ADNPQ9H2P0 1102 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 CCDC86Q9H6F5 360 aaKnown RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 ALKBH4Q9NXW9 302 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 BOKQ9UMX3 212 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 GPR52Q9Y2T5 361 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 KLF13Q9Y2Y9 288 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 PCDHGA9Q9Y5G4 932 aaKnown RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 LIPGQ9Y5X9 500 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 A0A0J9YW62 118 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 A0A1W2PNR3 127 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 A0A1W2PNV4 684 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 MPZL2O60487 215 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 WISP2O76076 250 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CD14P08571 375 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 HLA-DOBP13765 273 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 APEHP13798 732 aaKnown RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 HIST1H1CP16403 213 aaKnown RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 PCMT1P22061 227 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 MAGEA5P43359 124 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CLK1P49759 484 aaKnown RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 LHX2P50458 406 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CLDN20P56880 219 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 PRPS1P60891 318 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 ERVK-25P63136 954 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 ARG2P78540 354 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 H3F3AP84243 136 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 PMP22Q01453 160 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 ZNF91Q05481 1191 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CRMP1Q14194 572 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 OR7A5Q15622 319 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 ALG10Q5BKT4 473 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 LCE2DQ5TA82 110 aaPredicted RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 RAET1LQ5VY80 246 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 ZNF773Q6PK81 442 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CASP12Q6UXS9 341 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CCDC81Q6ZN84 652 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 MAMDC2Q7Z304 686 aaPredicted RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 SLC37A3Q8NCC5 494 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 NPEPL1Q8NDH3 523 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 BPIFB6Q8NFQ5 453 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 OR52L1Q8NGH7 329 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 SNRNP27Q8WVK2 155 aaKnown RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 ZNRF4Q8WWF5 429 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 GGHQ92820 318 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 DDIT4LQ96D03 193 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 RASD2Q96D21 266 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 Q96M85 177 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 C5orf34Q96MH7 638 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 IFT27Q9BW83 186 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 SRXN1Q9BYN0 137 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 FN3KQ9H479 309 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 ZDHHC11Q9H8X9 412 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 CHST11Q9NPF2 352 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 MRPS18AQ9NVS2 196 aaKnown RBP9.32□□□□□ -0.92
TPM3-217ENST00000504663 IMPAD1Q9NX62 359 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 BAIAP2Q9UQB8 552 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 RAXQ9Y2V3 346 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 HDGFL3Q9Y3E1 203 aa9.32□□□□□ -0.92
TPM3-217ENST00000504663 hCG_2014768A0A024R1R8 64 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TEX13CA0A0J9YWL9 993 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SH3D21A4FU49 640 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 FAM183AA6NL82 134 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 FAM166BA8MTA8 275 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 FAM47E-STBD1D6RA91 191 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 J3QRE1 110 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TRAF3IP2O43734 574 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 TLX2O43763 284 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 OR2T1O43869 369 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 PMS2P2O95744 297 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 MT-ND2P03891 347 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ITGB2P05107 769 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 F13BP05160 661 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 C1QTNF9P0C862 333 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 DBTP11182 482 aaKnown RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 PIPP12273 146 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 BMP7P18075 431 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 GDF1P27539 372 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SFTPDP35247 375 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ALDH3B2P48448 385 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SUCLG1P53597 346 aaKnown RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 CLDN18P56856 261 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 RAC1P63000 192 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TOP3AQ13472 1001 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 IRF3Q14653 427 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 SNAPC1Q16533 368 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TMEM176BQ3YBM2 270 aaPredicted RBP9.31□□□□□ -0.92
TPM3-217ENST00000504663 SLC35F1Q5T1Q4 408 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ARMC4Q5T2S8 1044 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 NXNL2Q5VZ03 156 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 XAF1Q6GPH4 301 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 NIPAL3Q6P499 406 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 ARHGAP11AQ6P4F7 1023 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TMEM154Q6P9G4 183 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 B3GNT6Q6ZMB0 384 aa9.31□□□□□ -0.92
TPM3-217ENST00000504663 TMPPEQ6ZT21 453 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms