RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 GZMMP51124 257 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 CCR4P51679 360 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 RAC3P60763 192 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 PLAURQ03405 335 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 CHRNB3Q05901 458 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 CBFBQ13951 182 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 LARS2Q15031 903 aaKnown RBP13.84□□□□□ -0.19
DDR1-250ENST00000503628 MRPL2Q5T653 305 aaKnown RBP13.84□□□□□ -0.19
DDR1-250ENST00000503628 KLHL17Q6TDP4 642 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 HACD2Q6Y1H2 254 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 VRK2Q86Y07 508 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 ZNF100Q8IYN0 542 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.84□□□□□ -0.19
DDR1-250ENST00000503628 BCAS4Q8TDM0 211 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 GPR119Q8TDV5 335 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 FOXN4Q96NZ1 517 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 ECSITQ9BQ95 431 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 PIMREGQ9BSJ6 248 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 C1QTNF6Q9BXI9 259 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 EXOSC3Q9NQT5 275 aaKnown RBP13.84□□□□□ -0.19
DDR1-250ENST00000503628 ZNF232Q9UNY5 417 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 ANGPT4Q9Y264 503 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 ZNF443Q9Y2A4 671 aaPredicted RBP13.84□□□□□ -0.19
DDR1-250ENST00000503628 IFT52Q9Y366 437 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 SLC25A15Q9Y619 301 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
DDR1-250ENST00000503628 CIB4A0PJX0 185 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 M0R1B8 84 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 DNAJA2O60884 412 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 TOMM34Q15785 309 aaPredicted RBP13.83□□□□□ -0.2
DDR1-250ENST00000503628 RNF220Q5VTB9 566 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 C8orf82Q6P1X6 216 aaPredicted RBP13.83□□□□□ -0.2
DDR1-250ENST00000503628 ZNF836Q6ZNA1 936 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 ARPINQ7Z6K5 226 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 CALHM3Q86XJ0 350 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 KRT73Q86Y46 540 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 SLC30A8Q8IWU4 369 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 CNOT9Q92600 299 aaKnown RBP13.83□□□□□ -0.2
DDR1-250ENST00000503628 ZNF607Q96SK3 696 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 HOPXQ9BPY8 73 aaPredicted RBP13.83□□□□□ -0.2
DDR1-250ENST00000503628 PIF1Q9H611 641 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 ARL8BQ9NVJ2 186 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 TAGLN3Q9UI15 199 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 AP3M1Q9Y2T2 418 aa13.83□□□□□ -0.2
DDR1-250ENST00000503628 GPC6Q9Y625 555 aaPredicted RBP13.83□□□□□ -0.2
DDR1-250ENST00000503628 CDHR4A6H8M9 788 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 NDUFS8O00217 210 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 SMAD9O15198 467 aaKnown RBP13.82□□□□□ -0.2
DDR1-250ENST00000503628 CYTIPO60759 359 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 IGHV3-9P01782 118 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 PGCP20142 388 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 SLC7A1P30825 629 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 APOBEC3AP31941 199 aaPredicted RBP13.82□□□□□ -0.2
DDR1-250ENST00000503628 PCGF2P35227 344 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 QPRTQ15274 297 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 CARTPTQ16568 116 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 ZSWIM7Q19AV6 140 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 VMACQ2NL98 169 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 IQCCQ4KMZ1 466 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 ZNF311Q5JNZ3 666 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 GALNT5Q7Z7M9 940 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 FITM2Q8N6M3 262 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 SOX7Q9BT81 388 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 SPATA5L1Q9BVQ7 753 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 ARMC7Q9H6L4 198 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 RLIMQ9NVW2 624 aa13.82□□□□□ -0.2
DDR1-250ENST00000503628 CCT8L1PA6NM43 557 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 ZNF724A8MTY0 619 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 PRKCAP17252 672 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 EGR1P18146 543 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 AQP1P29972 269 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 PRKAR1BP31321 381 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 PCBP3P57721 371 aaKnown RBP13.81□□□□□ -0.2
DDR1-250ENST00000503628 KRT72Q14CN4 511 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 MST1LQ2TV78 715 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 FBXW9Q5XUX1 488 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 ERICH5Q6P6B1 374 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 SLC15A3Q8IY34 581 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 ZNF440Q8IYI8 595 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 UBE2J2Q8N2K1 259 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 CLIP4Q8N3C7 705 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 ZNF583Q96ND8 569 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 SORCS2Q96PQ0 1159 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 CMTM6Q9NX76 183 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 CHST2Q9Y4C5 530 aa13.81□□□□□ -0.2
DDR1-250ENST00000503628 MGAM2Q2M2H8 2515 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 PRORSD1PA6NEY8 169 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 CFAP73A6NFT4 308 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 FAM220BPB1ANY3 271 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
DDR1-250ENST00000503628 SERPINB7O75635 380 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 ZNF23P17027 643 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 RYKP34925 604 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
DDR1-250ENST00000503628 SLC7A2P52569 658 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 SWI5Q1ZZU3 235 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
DDR1-250ENST00000503628 INTS11Q5TA45 600 aaKnown RBP13.8□□□□□ -0.2
DDR1-250ENST00000503628 DHRS4L2Q6PKH6 230 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms