RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CLOCKO15516 846 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 PLAUP00749 431 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 NQO1P15559 274 aaKnown RBP18.15■□□□□ 0.5
COL9A2-211ENST00000496215 ZNF43P17038 809 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 CBLP22681 906 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 HOXC12P31275 282 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 LSP1P33241 339 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 SELENOPP49908 381 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 FOXG1P55316 489 aaPredicted RBP18.15■□□□□ 0.5
COL9A2-211ENST00000496215 GABRA6Q16445 453 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 KRTAP1-3Q8IUG1 177 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 EPHX4Q8IUS5 362 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 KDM8Q8N371 416 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 C17orf78Q8N4C9 275 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 C10orf53Q8N6V4 93 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 OR52N5Q8NH56 324 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 ALKBH3Q96Q83 286 aaPredicted RBP18.15■□□□□ 0.5
COL9A2-211ENST00000496215 PIP5K1AQ99755 562 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 ASPNQ9BXN1 380 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 AMBRA1Q9C0C7 1298 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 PCDHAC1Q9H158 963 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 SLC7A7Q9UM01 511 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 RCE1Q9Y256 329 aa18.15■□□□□ 0.5
COL9A2-211ENST00000496215 ZNF587BE7ETH6 402 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 AKAP8O43823 692 aaKnown RBP18.14■□□□□ 0.49
COL9A2-211ENST00000496215 BGLAPP02818 100 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 MPGP29372 298 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 NUDT2P50583 147 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 CLDN17P56750 224 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 C1DQ13901 141 aaKnown RBP18.14■□□□□ 0.49
COL9A2-211ENST00000496215 H1FNTQ75WM6 255 aaPredicted RBP18.14■□□□□ 0.49
COL9A2-211ENST00000496215 CPLX4Q7Z7G2 160 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 CARM1Q86X55 608 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 TREML1Q86YW5 311 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 MICU2Q8IYU8 434 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 SCAIQ8N9R8 606 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 OXGR1Q96P68 337 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 NPAP1Q9NZP6 1156 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 B3GAT1Q9P2W7 334 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 SH3GLB1Q9Y371 365 aa18.14■□□□□ 0.49
COL9A2-211ENST00000496215 SETD2Q9BYW2 2564 aaPredicted RBP18.13■□□□□ 0.49
COL9A2-211ENST00000496215 ELOVL7A1L3X0 281 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 SMPD2O60906 423 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 DRD4P21917 467 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 ADAM5Q6NVV9 412 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 KLHL24Q6TFL4 600 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 WDR88Q6ZMY6 472 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 AKAP1Q92667 903 aaKnown RBP eCLIP18.13■□□□□ 0.49
COL9A2-211ENST00000496215 CMTM5Q96DZ9 223 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 SLC41A3Q96GZ6 507 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 MUS81Q96NY9 551 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 MOGAT1Q96PD6 335 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 TMUB1Q9BVT8 246 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 EFCAB1Q9HAE3 211 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 CMTM6Q9NX76 183 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 AMDHD2Q9Y303 409 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 SLC25A15Q9Y619 301 aa18.13■□□□□ 0.49
COL9A2-211ENST00000496215 A0A1W2PR80 420 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 SNX3O60493 162 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 SLC43A1O75387 559 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 MT-ATP6P00846 226 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 THY1P04216 161 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 TNFRSF1BP20333 461 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 SLC7A2P52569 658 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 GNGT1P63211 74 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 LGALS3BPQ08380 585 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 CYBRD1Q53TN4 286 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 TTC33Q6PID6 262 aaPredicted RBP18.12■□□□□ 0.49
COL9A2-211ENST00000496215 KLHL17Q6TDP4 642 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 LINC00114Q6XXX2 140 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 HACD2Q6Y1H2 254 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 DEF8Q6ZN54 512 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 TSPYL5Q86VY4 417 aaPredicted RBP18.12■□□□□ 0.49
COL9A2-211ENST00000496215 TGIF2LYQ8IUE0 185 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 UEVLDQ8IX04 471 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 ZNF611Q8N823 705 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 KBTBD8Q8NFY9 601 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 FBXW5Q969U6 566 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 MPP4Q96JB8 637 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 HOPXQ9BPY8 73 aaPredicted RBP18.12■□□□□ 0.49
COL9A2-211ENST00000496215 MYLK2Q9H1R3 596 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 SLC17A5Q9NRA2 495 aa18.12■□□□□ 0.49
COL9A2-211ENST00000496215 MRPL39Q9NYK5 338 aaKnown RBP18.12■□□□□ 0.49
COL9A2-211ENST00000496215 GMNCA6NCL1 334 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 DPRXA6NFQ7 191 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 LRRN3E7EW58 273 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 KPNA4O00629 521 aaPredicted RBP18.11■□□□□ 0.49
COL9A2-211ENST00000496215 TRAF3IP2O43734 574 aaPredicted RBP18.11■□□□□ 0.49
COL9A2-211ENST00000496215 LYPD3O95274 346 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 CDH2P19022 906 aaPredicted RBP18.11■□□□□ 0.49
COL9A2-211ENST00000496215 KDELR2P33947 212 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 ZNF83P51522 516 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 GYS2P54840 703 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 ADAM8P78325 824 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 POU3F1Q03052 451 aaPredicted RBP18.11■□□□□ 0.49
COL9A2-211ENST00000496215 LIPEQ05469 1076 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 LTBQ06643 244 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 PUDPQ08623 228 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 PMS2P3Q13401 168 aa18.11■□□□□ 0.49
COL9A2-211ENST00000496215 TMEM108Q6UXF1 575 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms