RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 FUT1P19526 365 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 ASCL1P50553 236 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 PRKCDQ05655 676 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 C1DQ13901 141 aaKnown RBP15.22■□□□□ 0.03
HDAC6-235ENST00000495515 POU4F3Q15319 338 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 NANOGNBQ7Z5D8 188 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 LINC00471Q8N535 108 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 OR9K2Q8NGE7 335 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 LIPHQ8WWY8 451 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 ALPK1Q96QP1 1244 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 C20orf141Q9NUB4 165 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 NOSIPQ9Y314 301 aaKnown RBP15.22■□□□□ 0.03
HDAC6-235ENST00000495515 KLF2Q9Y5W3 355 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-235ENST00000495515 DIDO1Q9BTC0 2240 aaKnown RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 TRBV4-1A0A0J9YWV2 114 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 LRRN3E7EW58 273 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 AKAP8O43823 692 aaKnown RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 RAMP1O60894 148 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 FKBP6O75344 327 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 CST1P01037 141 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 ASAH2BP0C7U1 165 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 SAGP10523 405 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 ERFP50548 548 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 P2RY4P51582 365 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 HMGA2P52926 109 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 PUDPQ08623 228 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 TAF11Q15544 211 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 ANKDD1AQ495B1 522 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 VWA1Q6PCB0 445 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 SLC46A3Q7Z3Q1 461 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 BTLAQ7Z6A9 289 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 LSRQ86X29 649 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 RELL2Q8NC24 303 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 PAPD5Q8NDF8 572 aaKnown RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 OR4K5Q8NGD3 323 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 UCK2Q9BZX2 261 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 PLSCR4Q9NRQ2 329 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 FOXD3Q9UJU5 478 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 ING1Q9UK53 422 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-235ENST00000495515 NOX1Q9Y5S8 564 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 FLVCR1Q9Y5Y0 555 aa15.21■□□□□ 0.03
HDAC6-235ENST00000495515 SH3PXD2BA1X283 911 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 EFCAB9A8MZ26 197 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 PLPP3O14495 311 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 PIP5K1CO60331 668 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 OR10H3O60404 316 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 MRPL33O75394 65 aaKnown RBP15.2■□□□□ 0.02
HDAC6-235ENST00000495515 RNF224P0DH78 156 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 ADORA3P0DMS8 318 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 FUT4P22083 530 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 AHCYP23526 432 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 SLC9A3P48764 834 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 ACTR3P61158 418 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 CCNIQ14094 377 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 TBPL2Q6SJ96 375 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 TMPRSS11FQ6ZWK6 438 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 PXKQ7Z7A4 578 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 UEVLDQ8IX04 471 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 ZNF100Q8IYN0 542 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 LRRC17Q8N6Y2 441 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 TMEM45BQ96B21 275 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 ZNF775Q96BV0 537 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-235ENST00000495515 NDEL1Q9GZM8 345 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 C12orf49Q9H741 205 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 SEC14L4Q9UDX3 406 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 SAMHD1Q9Y3Z3 626 aaKnown RBP15.2■□□□□ 0.02
HDAC6-235ENST00000495515 LYVE1Q9Y5Y7 322 aa15.2■□□□□ 0.02
HDAC6-235ENST00000495515 FLNCQ14315 2725 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 ARHGAP21Q5T5U3 1957 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 A8MXE2 369 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 CGAP01215 116 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 ZP4Q12836 540 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 EXOC3L2Q2M3D2 409 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 FBXL19-AS1Q494R0 122 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 BEND4Q6ZU67 534 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 CREB3L2Q70SY1 520 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 NUFIP2Q7Z417 695 aaKnown RBP15.19■□□□□ 0.02
HDAC6-235ENST00000495515 LUZP2Q86TE4 346 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 OAFQ86UD1 273 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 KDM8Q8N371 416 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 ANKK1Q8NFD2 765 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 APH1AQ96BI3 265 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 DUS3LQ96G46 650 aaKnown RBP15.19■□□□□ 0.02
HDAC6-235ENST00000495515 FUZQ9BT04 418 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 ARMC1Q9NVT9 282 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 JKAMPQ9P055 326 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 AP4S1Q9Y587 144 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 DOPEY1Q5JWR5 2465 aa15.19■□□□□ 0.02
HDAC6-235ENST00000495515 KIAA1549Q9HCM3 1950 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 HECTD1Q9ULT8 2610 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 NCOA6Q14686 2063 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 RELNP78509 3460 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 USP9XQ93008 2570 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 NKX2-6A6NCS4 301 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 OR6C65A6NJZ3 312 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 MS4A18H0YCH9 400 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 HNRNPRO43390 633 aaKnown RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 RNF13O43567 381 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 DEAF1O75398 565 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms