RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LRRN3E7EW58 273 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 MSTNO14793 375 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 FFAR1O14842 300 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 GSC2O15499 205 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 DIRAS1O95057 198 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 CH25HO95992 272 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 SEMG1P04279 462 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 H1F0P07305 194 aaKnown RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 YES1P07947 543 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 UMPSP11172 480 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 ITGA2P17301 1181 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 RHCEP18577 417 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 SLC16A1P53985 500 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 H3F3AP84243 136 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 SPIBQ01892 262 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 TRAP1Q12931 704 aaKnown RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 FGD3Q5JSP0 725 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 TMEM225Q6GV28 225 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 PGM2L1Q6PCE3 622 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 NUFIP2Q7Z417 695 aaKnown RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 GALNT5Q7Z7M9 940 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 OR9K2Q8NGE7 335 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 OR6S1Q8NH40 331 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 PFN4Q8NHR9 129 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 TMEM239Q8WW34 195 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 ZNF775Q96BV0 537 aaPredicted RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 C7orf34Q96L11 122 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 HS6ST2Q96MM7 605 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 MOGAT1Q96PD6 335 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 PIP5K1AQ99755 562 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 RBM24Q9BX46 236 aaKnown RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 SLC19A3Q9BZV2 496 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 KLHL4Q9C0H6 718 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 CXXC4Q9H2H0 198 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 MAN2C1Q9NTJ4 1040 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 NDUFAF4Q9P032 175 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 ING1Q9UK53 422 aaPredicted RBP10.29□□□□□ -0.76
CTSA-209ENST00000493522 MED31Q9Y3C7 131 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 TESMINQ9Y4I5 508 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
CTSA-209ENST00000493522 IGKV3D-15A0A087WSY6 115 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 ZNF724A8MTY0 619 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 GPR171O14626 319 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 FZD7O75084 574 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 PRSS23O95084 383 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 MT-ATP6P00846 226 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 MT-ND1P03886 318 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 CD8BP10966 210 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 FUT4P22083 530 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 CHRNB3Q05901 458 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 PMS2P3Q13401 168 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 PDK3Q15120 406 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 ZNF74Q16587 644 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 EXOC3L2Q2M3D2 409 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 FAM98BQ52LJ0 330 aaKnown RBP10.28□□□□□ -0.76
CTSA-209ENST00000493522 CASP12Q6UXS9 341 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 ZNF730Q6ZMV8 503 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 NANOGNBQ7Z5D8 188 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 TSEN54Q7Z6J9 526 aaKnown RBP10.28□□□□□ -0.76
CTSA-209ENST00000493522 STK32CQ86UX6 486 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 SPATA24Q86W54 205 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 TGIF2LYQ8IUE0 185 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 ZDHHC21Q8IVQ6 265 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 ZNF100Q8IYN0 542 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 SCAIQ8N9R8 606 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 PIK3C3Q8NEB9 887 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 NRGNQ92686 78 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
CTSA-209ENST00000493522 SGTBQ96EQ0 304 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 MAGIXQ9H6Y5 334 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 FKRPQ9H9S5 495 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 NMNAT1Q9HAN9 279 aaPredicted RBP10.28□□□□□ -0.76
CTSA-209ENST00000493522 MEPEQ9NQ76 525 aaPredicted RBP10.28□□□□□ -0.76
CTSA-209ENST00000493522 NANSQ9NR45 359 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 GALNT8Q9NY28 637 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 JKAMPQ9P055 326 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 SLC7A8Q9UHI5 535 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 EDARQ9UNE0 448 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 POMPQ9Y244 141 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 NOSIPQ9Y314 301 aaKnown RBP10.28□□□□□ -0.76
CTSA-209ENST00000493522 FLVCR1Q9Y5Y0 555 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 ABCA4P78363 2273 aa10.28□□□□□ -0.76
CTSA-209ENST00000493522 AQP12BA6NM10 295 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 ACOT8O14734 319 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 SERPINI2O75830 405 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 VAMP5O95183 116 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 OR6A2O95222 327 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 CGAP01215 116 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 HIST1H2ABP04908 130 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 IFI30P13284 250 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 POU2F1P14859 743 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 PEX19P40855 299 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 OR3A2P47893 321 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 ERFP50548 548 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 P2RY4P51582 365 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 LTBQ06643 244 aa10.27□□□□□ -0.77
CTSA-209ENST00000493522 C1DQ13901 141 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms