RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KDM8Q8N371 416 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 ZNF433Q8N7K0 673 aaPredicted RBP16.06■□□□□ 0.16
COL1A1-207ENST00000486572 GEMIN6Q8WXD5 167 aaKnown RBP16.06■□□□□ 0.16
COL1A1-207ENST00000486572 PIK3IP1Q96FE7 263 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 PRRC1Q96M27 445 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 SLCO5A1Q9H2Y9 848 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 SLC7A10Q9NS82 523 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 MRPL39Q9NYK5 338 aaKnown RBP16.06■□□□□ 0.16
COL1A1-207ENST00000486572 TAS2R16Q9NYV7 291 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 UPB1Q9UBR1 384 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 EGFL7Q9UHF1 273 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 RIMS3Q9UJD0 308 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 LOC102725191A0A1B0GVB3 256 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 LRRN3E7EW58 273 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 KPNA4O00629 521 aaPredicted RBP16.05■□□□□ 0.16
COL1A1-207ENST00000486572 GMNNO75496 209 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 IFNW1P05000 195 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 HSD17B1P14061 328 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 DNAJA1P31689 397 aaKnown RBP16.05■□□□□ 0.16
COL1A1-207ENST00000486572 RBM34P42696 430 aaKnown RBP16.05■□□□□ 0.16
COL1A1-207ENST00000486572 IL1RL1Q01638 556 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 PMS2P3Q13401 168 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 C1DQ13901 141 aaKnown RBP16.05■□□□□ 0.16
COL1A1-207ENST00000486572 TAB1Q15750 504 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 ZNF74Q16587 644 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 BEX5Q5H9J7 111 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 SAMD4BQ5PRF9 694 aaKnown RBP16.05■□□□□ 0.16
COL1A1-207ENST00000486572 FKBP9P1Q75LS8 142 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 POMGNT2Q8NAT1 580 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 HSD17B8Q92506 261 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 NRGNQ92686 78 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 HSH2DQ96JZ2 352 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 RPS6KA6Q9UK32 745 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 RCE1Q9Y256 329 aa16.05■□□□□ 0.16
COL1A1-207ENST00000486572 OR6C65A6NJZ3 312 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 PDLIM1O00151 329 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 RAD51DO75771 328 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 TCN1P20061 433 aaPredicted RBP16.04■□□□□ 0.16
COL1A1-207ENST00000486572 IFNA8P32881 189 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 SELENOPP49908 381 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 CLDN17P56750 224 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 PUDPQ08623 228 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 STK11Q15831 433 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 GLYATQ6IB77 296 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 NIPAL3Q6P499 406 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 NKAIN4Q8IVV8 208 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 UEVLDQ8IX04 471 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 DEFB107AQ8IZN7 70 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 FAM156AQ8NDB6 213 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 OR5J2Q8NH18 312 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 TMEM255BQ8WV15 326 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 CDRT15Q96T59 188 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 AMBRA1Q9C0C7 1298 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 FKRPQ9H9S5 495 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 MAGEL2Q9UJ55 1249 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 A4GNTQ9UNA3 340 aa16.04■□□□□ 0.16
COL1A1-207ENST00000486572 CSMD2Q7Z408 3487 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.03■□□□□ 0.16
COL1A1-207ENST00000486572 A0A1W2PPR1 153 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 CIB4A0PJX0 185 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 OR5H1A6NKK0 313 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 MS4A18H0YCH9 400 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 PLPP3O14495 311 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 KLF4O43474 513 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 TRAF3IP2O43734 574 aaPredicted RBP16.03■□□□□ 0.16
COL1A1-207ENST00000486572 AKAP8O43823 692 aaKnown RBP16.03■□□□□ 0.16
COL1A1-207ENST00000486572 KRT33AO76009 404 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 CH25HO95992 272 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 HPRP00739 348 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 ITGA5P08648 1049 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 NR1H2P55055 460 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 ST3GAL3Q11203 375 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 FXNQ16595 210 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 MS4A18Q3C1V0 323 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 SPATS1Q496A3 300 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 TIMM23BQ5SRD1 257 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 ALKBH2Q6NS38 261 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 SSX8Q7RTT4 187 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 ABHD12BQ7Z5M8 362 aaPredicted RBP16.03■□□□□ 0.16
COL1A1-207ENST00000486572 P2RY8Q86VZ1 359 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 OFCC1Q8IZS5 231 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 TMEM239Q8WW34 195 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 NSL1Q96IY1 281 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 HS6ST2Q96MM7 605 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 PLEKHF2Q9H8W4 249 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 NGBQ9NPG2 151 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 MEPEQ9NQ76 525 aaPredicted RBP16.03■□□□□ 0.16
COL1A1-207ENST00000486572 NANSQ9NR45 359 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 CD300AQ9UGN4 299 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 ZNF229Q9UJW7 825 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 SAMD4AQ9UPU9 718 aaKnown RBP16.03■□□□□ 0.16
COL1A1-207ENST00000486572 NOX1Q9Y5S8 564 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 SNX13Q9Y5W8 968 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 CSMD1Q96PZ7 3565 aa16.03■□□□□ 0.16
COL1A1-207ENST00000486572 ABCA4P78363 2273 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 SPG11Q96JI7 2443 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 ENO4A6NNW6 628 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 IGF2P01344 180 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 MT-ND1P03886 318 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 CALB2P22676 271 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms