RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 GYS2P54840 703 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 NKX6-1P78426 367 aaPredicted RBP10.79□□□□□ -0.68
MSH5-216ENST00000484309 SLC25A3Q00325 362 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 LTBQ06643 244 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 SPOCK1Q08629 439 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 LRRC23Q53EV4 343 aaPredicted RBP10.79□□□□□ -0.68
MSH5-216ENST00000484309 WDR88Q6ZMY6 472 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 LINGO2Q7L985 606 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 SPATA21Q7Z572 469 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 TREML1Q86YW5 311 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 KRTAP1-3Q8IUG1 177 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 PIGTQ969N2 578 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 MOGAT1Q96PD6 335 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 GID8Q9NWU2 228 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 B3GAT1Q9P2W7 334 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 SLC25A15Q9Y619 301 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 FAM220BPB1ANY3 271 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 M0R1B8 84 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 ABCD4O14678 606 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 CHP2O43745 196 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 FMO6PO60774 539 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 UPK3AO75631 287 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 SERPINI2O75830 405 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 LYPD3O95274 346 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 C8BP07358 591 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
MSH5-216ENST00000484309 ZNF43P17038 809 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 MPGP29372 298 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 C1DQ13901 141 aaKnown RBP10.78□□□□□ -0.68
MSH5-216ENST00000484309 HIKESHIQ53FT3 197 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 Q5PR19 223 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 ZNF613Q6PF04 617 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 C5orf46Q6UWT4 87 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 DEF8Q6ZN54 512 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 CCDC80Q76M96 950 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 P2RY8Q86VZ1 359 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 CARM1Q86X55 608 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 WDR31Q8NA23 367 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 POMGNT2Q8NAT1 580 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 OR2T12Q8NG77 320 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 RP9Q8TA86 221 aaKnown RBP10.78□□□□□ -0.68
MSH5-216ENST00000484309 ADAMTS16Q8TE57 1224 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 FBXW5Q969U6 566 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 OXGR1Q96P68 337 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 EPYCQ99645 322 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
MSH5-216ENST00000484309 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 EVA1AQ9H8M9 152 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 CMTM6Q9NX76 183 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 SLC7A7Q9UM01 511 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 LAMP3Q9UQV4 416 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 SH3GLB1Q9Y371 365 aa10.78□□□□□ -0.68
MSH5-216ENST00000484309 ZNF587BE7ETH6 402 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 MS4A18H0YCH9 400 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 SLC22A2O15244 555 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TRAF3IP2O43734 574 aaPredicted RBP10.77□□□□□ -0.69
MSH5-216ENST00000484309 CCDC22O60826 627 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 NPPAP01160 153 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 HLA-DOBP13765 273 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 HOXC12P31275 282 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 OR1E2P47887 323 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 CDH11P55287 796 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TUBA1BP68363 451 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TUBA4AP68366 448 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 POU3F1Q03052 451 aaPredicted RBP10.77□□□□□ -0.69
MSH5-216ENST00000484309 PMS2P3Q13401 168 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 MS4A18Q3C1V0 323 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.69
MSH5-216ENST00000484309 SWT1Q5T5J6 900 aaKnown RBP10.77□□□□□ -0.69
MSH5-216ENST00000484309 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 OR7E24Q6IFN5 339 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 ERICH5Q6P6B1 374 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TUBA1AQ71U36 451 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 H1FNTQ75WM6 255 aaPredicted RBP10.77□□□□□ -0.69
MSH5-216ENST00000484309 MICU2Q8IYU8 434 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 ZNF611Q8N823 705 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TMEM171Q8WVE6 324 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 RASSF5Q8WWW0 418 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 PROX1Q92786 737 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TPD52L3Q96J77 140 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 MUS81Q96NY9 551 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 PIP5K1AQ99755 562 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 TMEM43Q9BTV4 400 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 EMC6Q9BV81 110 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 ASPNQ9BXN1 380 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 AMBRA1Q9C0C7 1298 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 SLC17A5Q9NRA2 495 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 B3GALT5Q9Y2C3 310 aa10.77□□□□□ -0.69
MSH5-216ENST00000484309 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 A0A096LPE4 126 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 A0A1W2PPZ6 126 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 TRAPPC13A5PLN9 417 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 SHISA9B4DS77 424 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 C11orf98E9PRG8 122 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 FZD7O75084 574 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 SLC43A1O75387 559 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 CH25HO95992 272 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 SOD3P08294 240 aa10.76□□□□□ -0.69
MSH5-216ENST00000484309 DRD4P21917 467 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms