RNA–Protein interactions for RNA: ENST00000479056.1

ACTL6A-208, Transcript of actin like 6A, human

TSL 4

Gene ACTL6A, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTL6A-208	ENST00000479056	MCUR1	Q96AQ8	359 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ZNF707	Q96C28	371 aa	Predicted RBP	3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	MSANTD3	Q96H12	275 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PANX2	Q96RD6	677 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	CCNL2	Q96S94	520 aa	Predicted RBP	3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	NRTN	Q99748	197 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	LLPH	Q9BRT6	129 aa	Known RBP	3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TDRD3	Q9H7E2	651 aa	Known RBP	3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	C8orf33	Q9H7E9	229 aa	Predicted RBP	3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SPACA1	Q9HBV2	294 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ZFP14	Q9HCL3	533 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	OR10H1	Q9Y4A9	318 aa		3.37	□□□□□ -1.87
ACTL6A-208	ENST00000479056	KIF27	Q86VH2	1401 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	LRRK1	Q38SD2	2015 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056		A0A1B0GUA9	196 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PSMB11	A5LHX3	300 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	FOXE1	O00358	373 aa	Predicted RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ARPC3	O15145	178 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	BCAS1	O75363	584 aa	Predicted RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	IGKV3-11	P04433	115 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ZNF853	P0CG23	659 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	UQCRC2	P22695	453 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TUBG1	P23258	451 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PPT1	P50897	306 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PLK1	P53350	603 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	APOC4	P55056	127 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	MAB21L1	Q13394	359 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	CHRNA6	Q15825	494 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SLC5A12	Q1EHB4	618 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	KHDRBS2	Q5VWX1	349 aa	Known RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	C16orf62	Q7Z3J2	963 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TPRA1	Q86W33	373 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	VRK2	Q86Y07	508 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ANKFN1	Q8N957	763 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	C20orf203	Q8NBC4	194 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SPATA4	Q8NEY3	305 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	OR5D13	Q8NGL4	314 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	NEIL3	Q8TAT5	605 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	MYLPF	Q96A32	169 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	C7orf34	Q96L11	122 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ROPN1B	Q9BZX4	212 aa	Predicted RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ZNF385D	Q9H6B1	395 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	AUNIP	Q9H7T9	357 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SGK2	Q9HBY8	427 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TUBG2	Q9NRH3	451 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	KLHL28	Q9NXS3	571 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PDP1	Q9P0J1	537 aa	Predicted RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PEF1	Q9UBV8	284 aa	Known RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	BTNL2	Q9UIR0	455 aa		3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PACSIN2	Q9UNF0	486 aa	Predicted RBP	3.36	□□□□□ -1.87
ACTL6A-208	ENST00000479056	METTL21EP	A6NDL7	271 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PCP4L1	A6NKN8	68 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PPIAL4D	F5H284	164 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	GOLGA8T	H3BQL2	631 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	HCN1	O60741	890 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	UGT2B17	O75795	530 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SNAPIN	O95295	136 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	NDUFB10	O96000	172 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PRKACA	P17612	351 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	MX1	P20591	662 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TBXA2R	P21731	343 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	FDFT1	P37268	417 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	RPS15	P62841	145 aa	Known RBP	3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TPM4	P67936	248 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	XIAP	P98170	497 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	CSTF1	Q05048	431 aa	Known RBP	3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ENPEP	Q07075	957 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	FGL1	Q08830	312 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	NCBP1	Q09161	790 aa	Known RBP	3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	XRCC4	Q13426	336 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	COTL1	Q14019	142 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SYPL1	Q16563	259 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TATDN3	Q17R31	274 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ATL3	Q6DD88	541 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PYHIN1	Q6K0P9	492 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	EIF3M	Q7L2H7	374 aa	Known RBP	3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	DPY19L4	Q7Z388	723 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PAQR7	Q86WK9	346 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ERO1B	Q86YB8	467 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	VSTM4	Q8IW00	320 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ZNF683	Q8IZ20	524 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	ZNF433	Q8N7K0	673 aa	Predicted RBP	3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	SRSF12	Q8WXF0	261 aa	Known RBP	3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	MYDGF	Q969H8	173 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	CHRDL1	Q9BU40	450 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	DNTTIP1	Q9H147	329 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TMEM185B	Q9H7F4	350 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	RAB18	Q9NP72	206 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TREM1	Q9NP99	234 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	MMP26	Q9NRE1	261 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	GCNT4	Q9P109	453 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	KANK1	Q14678	1352 aa		3.35	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TRAV26-1	A0A087WT03	109 aa		3.34	□□□□□ -1.87
ACTL6A-208	ENST00000479056	GABRR3	A8MPY1	467 aa		3.34	□□□□□ -1.87
ACTL6A-208	ENST00000479056	NEBL	O76041	1014 aa		3.34	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TROVE2	P10155	538 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
ACTL6A-208	ENST00000479056	TPSB2	P20231	275 aa		3.34	□□□□□ -1.87
ACTL6A-208	ENST00000479056	PTN	P21246	168 aa		3.34	□□□□□ -1.87
ACTL6A-208	ENST00000479056	CTRL	P40313	264 aa		3.34	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms