RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 OR2T5Q6IEZ7 315 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ASB18Q6ZVZ8 466 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 PLEKHM3Q6ZWE6 761 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 RANBP3LQ86VV4 465 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ADGRG3Q86Y34 549 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 P3H2Q8IVL5 708 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 CHERPQ8IWX8 916 aaKnown RBP4.26□□□□□ -1.73
SF3B1-208ENST00000470268 KLHL36Q8N4N3 616 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ZADH2Q8N4Q0 377 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM251Q8N6I4 163 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 Q8NA96 180 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 PIK3C3Q8NEB9 887 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 TOR1AIP2Q8NFQ8 470 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 OR4C15Q8NGM1 316 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 OR2T29Q8NH02 315 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 C1GALT1C1Q96EU7 318 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 SLC41A3Q96GZ6 507 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF597Q96LX8 424 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 C5orf34Q96MH7 638 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 TAAR6Q96RI8 345 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ARMC7Q9H6L4 198 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 SDHAF3Q9NRP4 125 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 TAS2R10Q9NYW0 307 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 AASSQ9UDR5 926 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 OSGIN1Q9UJX0 560 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 SLC7A7Q9UM01 511 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 RPH3AQ9Y2J0 694 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-208ENST00000470268 KLF13Q9Y2Y9 288 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-208ENST00000470268 PCDHGB6Q9Y5F9 930 aa4.26□□□□□ -1.73
SF3B1-208ENST00000470268 ANKRD11Q6UB99 2663 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-208ENST00000470268 SMG1Q96Q15 3661 aaKnown RBP4.26□□□□□ -1.73
SF3B1-208ENST00000470268 IGKV1D-42A0A075B6H8 117 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 A0A087WUJ7 227 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 A0A1W2PRQ8 180 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TRAPPC13A5PLN9 417 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 FAM166BA8MTA8 275 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 KLRC4-KLRK1H3BQV0 150 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DENRO43583 198 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 CHP2O43745 196 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 AHCYL1O43865 530 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DPM1O60762 260 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 MITFO75030 526 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 CBR3O75828 277 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 OR5F1O95221 314 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 GADD45GO95257 159 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 LDLRP01130 860 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 H1F0P07305 194 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ATP6V1B1P15313 513 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ITGA2P17301 1181 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 PGCP20142 388 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 CCNA2P20248 432 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DPP4P27487 766 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 GDF1P27539 372 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SHC1P29353 583 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SLC6A8P48029 635 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 UGT2B15P54855 530 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DLX5P56178 289 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 B3GALT5-AS1P59052 145 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SPIBQ01892 262 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DGCR6Q14129 220 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF169Q14929 603 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 EXOC3L2Q2M3D2 409 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 HYAL4Q2M3T9 481 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 C1QL3Q5VWW1 255 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 WBP2NLQ6ICG8 309 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 PODNL1Q6PEZ8 512 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF613Q6PF04 617 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ULK3Q6PHR2 472 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 YRDCQ86U90 279 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 MEX3DQ86XN8 651 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF440Q8IYI8 595 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DRAXINQ8NBI3 349 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM178AQ8NBL3 297 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 FAM83FQ8NEG4 500 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 OR4K17Q8NGC6 315 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF563Q8TA94 476 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SNX33Q8WV41 574 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 CYGBQ8WWM9 190 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TM9SF4Q92544 642 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SGCDQ92629 289 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 POP5Q969H6 163 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SLC38A4Q969I6 547 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DNAJA3Q96EY1 480 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 CENPNQ96H22 339 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF347Q96SE7 839 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 GPA33Q99795 319 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SPATA25Q9BR10 227 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF559Q9BR84 538 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 FNDC11Q9BVV2 318 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TRIM2Q9C040 744 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM27Q9HBJ8 222 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 BARX1Q9HBU1 254 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 MEPEQ9NQ76 525 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 C20orf141Q9NUB4 165 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms