RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IDSB3KWA1 339 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 GNB5O14775 395 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 SHOXO15266 292 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 ABHD16AO95870 558 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 TXNDC12O95881 172 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 RAB40ALP0C0E4 278 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.41
BRCA1-209ENST00000470026 CDKN2AP42771 156 aaKnown RBP12.46□□□□□ -0.41
BRCA1-209ENST00000470026 AP2S1P53680 142 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-209ENST00000470026 ERVK-25P63136 954 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 TMEM255AQ5JRV8 349 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 HES5Q5TA89 166 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 PWWP2BQ6NUJ5 590 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF615Q8N8J6 731 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 OR13H1Q8NG92 308 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 OR52I2Q8NH67 350 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 MOSPD2Q8NHP6 518 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 RAB40AQ8WXH6 277 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 KLHL9Q9P2J3 617 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 FOXJ3Q9UPW0 622 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 MOKQ9UQ07 419 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 TRANK1O15050 2925 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 TRBV5-5A0A0J9YX44 114 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 A0A1W2PQ72 361 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 ANKRD20A5PA0PJZ0 165 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 UPK3AO75631 287 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 CRYZL1O95825 349 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 UQCRC1P31930 480 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 RABIFP47224 123 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 AP3S2P59780 193 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 MRPS21P82921 87 aaKnown RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF74Q16587 644 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 GPR139Q6DWJ6 353 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 KIAA1324Q6UXG2 1013 aaKnown RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 LINGO2Q7L985 606 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 SLC16A9Q7RTY1 509 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 ATG4DQ86TL0 474 aaPredicted RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 MCATQ8IVS2 390 aaKnown RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 C19orf47Q8N9M1 422 aaKnown RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 BEST4Q8NFU0 473 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 C16orf52Q8NHV5 167 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 ADAMTS18Q8TE60 1221 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 ORAI1Q96D31 301 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 HAVCR1Q96D42 359 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.42
BRCA1-209ENST00000470026 OR5V1Q9UGF6 321 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 RCE1Q9Y256 329 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 SLC6A5Q9Y345 797 aa12.46□□□□□ -0.42
BRCA1-209ENST00000470026 A0A0A6YYC8 382 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 RPS10-NUDT3A0A1W2PQS6 291 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 I3L1I5 382 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 TSC22D2O75157 780 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 KRT33AO76009 404 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 CLPSP04118 112 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 CELA2BP08218 269 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 CD14P08571 375 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 DNASE1P24855 282 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 STX4Q12846 297 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 EIF2B5Q13144 721 aaKnown RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF267Q14586 743 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 GXYLT1Q4G148 440 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 STPG1Q5TH74 334 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 MTFR2Q6P444 385 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 FCRLAQ7L513 359 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 CCDC28AQ8IWP9 274 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 C7orf61Q8IZ16 206 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 OR6V1Q8N148 313 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 OR6K6Q8NGW6 343 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 Q96M85 177 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 RBCK1Q9BYM8 510 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 SLC25A18Q9H1K4 315 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 LIN7BQ9HAP6 207 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 PRTFDC1Q9NRG1 225 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 GPR27Q9NS67 375 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 RXFP3Q9NSD7 469 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 MRM2Q9UI43 246 aaKnown RBP12.45□□□□□ -0.42
BRCA1-209ENST00000470026 F5P12259 2224 aa12.45□□□□□ -0.42
BRCA1-209ENST00000470026 LDOC1O95751 146 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 PNMTP11086 282 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 GALNSP34059 522 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 DHODHQ02127 395 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 Q499Y3 187 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 TMEM31Q5JXX7 168 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 LEG1Q6P5S2 330 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 NLRC3Q7RTR2 1065 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 NUP54Q7Z3B4 507 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 NSMAFQ92636 917 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 NXPE2Q96DL1 559 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 DGAT2Q96PD7 388 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms