RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TMEM185BQ9H7F4 350 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
DDX56-208ENST00000467318 ERVK-18Q9QC07 812 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 TMCC3Q9ULS5 477 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 MED31Q9Y3C7 131 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 MED12Q93074 2177 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 A0A087WUU8 490 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 M0R3G1 203 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 ZNHIT1O43257 154 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 OR2T1O43869 369 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 INMTO95050 263 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 GABARAPO95166 117 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 TFPIP10646 304 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 ACVR2AP27037 513 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 FMO3P31513 532 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 PTGS2P35354 604 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 GP2P55259 537 aaKnown RBP13.26□□□□□ -0.29
DDX56-208ENST00000467318 CLDN18P56856 261 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 RPS3AP61247 264 aaKnown RBP13.26□□□□□ -0.29
DDX56-208ENST00000467318 RBPJQ06330 500 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 PDSS1Q5T2R2 415 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 GFRALQ6UXV0 394 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 ZNF730Q6ZMV8 503 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 GGNQ86UU5 652 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 PARP8Q8N3A8 854 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 TMEM255BQ8WV15 326 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 SMPDL3BQ92485 455 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 YIPF6Q96EC8 236 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 COX4I2Q96KJ9 171 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 ALPK1Q96QP1 1244 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 PSD2Q9BQI7 771 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 WDR12Q9GZL7 423 aaKnown RBP13.26□□□□□ -0.29
DDX56-208ENST00000467318 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 ZNF556Q9HAH1 456 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 HMG20AQ9NP66 347 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 TRAPPC4Q9Y296 219 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 SVILO95425 2214 aa13.26□□□□□ -0.29
DDX56-208ENST00000467318 IGKV1D-42A0A075B6H8 117 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 TRAV36DV7A0A075B6V5 113 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 ZC3H12DA2A288 527 aaKnown RBP13.25□□□□□ -0.29
DDX56-208ENST00000467318 B8ZZF3 427 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 NPIPA2E9PIF3 369 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 NPIPA3F8WFD2 350 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 XPNPEP2O43895 674 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 FUT4P22083 530 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 GGT2P36268 569 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 LIMS1P48059 325 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 BMXP51813 675 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 CLDN20P56880 219 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 HSF1Q00613 529 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 FOXD4Q12950 439 aaPredicted RBP13.25□□□□□ -0.29
DDX56-208ENST00000467318 FAM69AQ5T7M9 428 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 C1orf140Q5VVS0 124 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 SLC16A12Q6ZSM3 486 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 TMPPEQ6ZT21 453 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 MBOAT2Q6ZWT7 520 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 ST6GALNAC3Q8NDV1 305 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 OR6S1Q8NH40 331 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 WDYHV1Q96HA8 205 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 ARL5BQ96KC2 179 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 OR5B2Q96R09 309 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 FUZQ9BT04 418 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 OR11A1Q9GZK7 315 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
DDX56-208ENST00000467318 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
DDX56-208ENST00000467318 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
DDX56-208ENST00000467318 A0A0J9YW62 118 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 TRBV4-1A0A0J9YWV2 114 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 EIF1AYO14602 144 aaKnown RBP13.24□□□□□ -0.29
DDX56-208ENST00000467318 SEC14L5O43304 696 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 AHSA1O95433 338 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 PMS2P2O95744 297 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 OPN1LWP04000 364 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 RANBP1P43487 201 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 CSNK2A1P68400 391 aaPredicted RBP13.24□□□□□ -0.29
DDX56-208ENST00000467318 PIGFQ07326 219 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 MYBPHQ13203 477 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 MFSD13AQ14CX5 517 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.294e-8■■■■□ 26.5
DDX56-208ENST00000467318 CTF1Q16619 201 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 MICAQ29983 383 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 PODNL1Q6PEZ8 512 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 P2RY8Q86VZ1 359 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 UBQLNLQ8IYU4 475 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 CDK20Q8IZL9 346 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 SGCDQ92629 289 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 MIB2Q96AX9 1013 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 ADGRG7Q96K78 797 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 MEPEQ9NQ76 525 aaPredicted RBP13.24□□□□□ -0.29
DDX56-208ENST00000467318 CHD6Q8TD26 2715 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 ARRDC5A6NEK1 342 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 AHRRA9YTQ3 701 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 CLDN25C9JDP6 229 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 SULT2B1O00204 365 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 TNFSF11O14788 317 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 DNPH1O43598 174 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 ABOP16442 354 aa13.24□□□□□ -0.29
DDX56-208ENST00000467318 SHC1P29353 583 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms