RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ST6GALNAC2Q9UJ37 374 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 ATRQ13535 2644 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 EFCAB9A8MZ26 197 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 PIP5K1CO60331 668 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 ABCD3P28288 659 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 CD96P40200 585 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 GPR4P46093 362 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 EFNB1P98172 346 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 SNTB1Q13884 538 aaKnown RBP12.49□□□□□ -0.41
HDAC6-215ENST00000465457 OR1C1Q15619 314 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 SNAPC1Q16533 368 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 PLAG1Q6DJT9 500 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 PAPD4Q6PIY7 484 aaKnown RBP12.49□□□□□ -0.41
HDAC6-215ENST00000465457 NUP54Q7Z3B4 507 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-215ENST00000465457 CD163Q86VB7 1156 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 CADM2Q8N3J6 435 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 PHOSPHO1Q8TCT1 267 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 NINJ1Q92982 152 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 ADOQ96SZ5 270 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 TMEM43Q9BTV4 400 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 TBL1XR1Q9BZK7 514 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 FN3KQ9H479 309 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 EGLN3Q9H6Z9 239 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 COQ3Q9NZJ6 369 aa12.49□□□□□ -0.41
HDAC6-215ENST00000465457 WARS2Q9UGM6 360 aaKnown RBP12.49□□□□□ -0.41
HDAC6-215ENST00000465457 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
HDAC6-215ENST00000465457 A0A087WUJ7 227 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 PRODHO43272 600 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 TLX2O43763 284 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-215ENST00000465457 AHCYL1O43865 530 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ENTPD6O75354 484 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 BCAS1O75363 584 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-215ENST00000465457 FADS2O95864 444 aaKnown RBP12.48□□□□□ -0.41
HDAC6-215ENST00000465457 SAGP10523 405 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-215ENST00000465457 SLC26A5P58743 744 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ST3GAL4Q11206 333 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ANKDD1AQ495B1 522 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 GPR107Q5VW38 600 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 SMARCD3Q6STE5 483 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF367Q7RTV3 350 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 GHDCQ8N2G8 530 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 APCDD1LQ8NCL9 501 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 OR8D4Q8NGM9 314 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 SGCDQ92629 289 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ARSGQ96EG1 525 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 LRR1Q96L50 414 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 PLA2G12AQ9BZM1 189 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 LRFN1Q9P244 771 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 KCNN3Q9UGI6 736 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 ICAM5Q9UMF0 924 aa12.48□□□□□ -0.41
HDAC6-215ENST00000465457 NINQ8N4C6 2090 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ZANQ9Y493 2812 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 TRIM64BA6NI03 449 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ELOA3DA6NLF2 546 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 KDM4EB2RXH2 506 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 PRRG2O14669 202 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SURF4O15260 269 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 NDUFB5O43674 189 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 CDC40O60508 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ICOSLGO75144 302 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 NEURL1O76050 574 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ZFAND5O76080 213 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 TPOP07202 933 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 HOXD4P09016 255 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 DBTP11182 482 aaKnown RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 FOSL1P15407 271 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 PGCP20142 388 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SLC6A6P31641 620 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 RFC3P40938 356 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 NUDT6P53370 316 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 GP2P55259 537 aaKnown RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SUMO3P55854 103 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 LSM11P83369 360 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF91Q05481 1191 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 PIGFQ07326 219 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 RAB40BQ12829 278 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 TMED1Q13445 227 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 CBFBQ13951 182 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 IRF3Q14653 427 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 EXT1Q16394 746 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ELOA3BQ3SY89 546 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 RTL4Q6ZR62 310 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ANKRD13BQ86YJ7 626 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 LNX2Q8N448 690 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SLC15A4Q8N697 577 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 IQCF1Q8N6M8 205 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms