RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ALKBH1Q13686 389 aaKnown RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SHHQ15465 462 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SLC25A35Q3KQZ1 300 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SLC36A2Q495M3 483 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF684Q5T5D7 378 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 FNDC7Q5VTL7 733 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 FDX2Q6P4F2 183 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 LEG1Q6P5S2 330 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 LYPD4Q6UWN0 246 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 IL20RBQ6UXL0 311 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 B3GLCTQ6Y288 498 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 FAM122BQ7Z309 247 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SIAH3Q8IW03 269 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SLC22A18ASQ8N1D0 253 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 C10orf53Q8N6V4 93 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 OR6S1Q8NH40 331 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 LGALS14Q8TCE9 139 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF431Q8TF32 576 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 HMGB4Q8WW32 186 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 DERL3Q96Q80 235 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 OR14A2Q96R54 314 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 NMNAT3Q96T66 252 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SPRTNQ9H040 489 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 WDR76Q9H967 626 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 CAPN10Q9HC96 672 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 FAM60AQ9NP50 221 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 MMP25Q9NPA2 562 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 NOX4Q9NPH5 578 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 TMEM74BQ9NUR3 256 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 CD207Q9UJ71 328 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 LAMP5Q9UJQ1 280 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 FBXL3Q9UKT7 428 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 MYO10Q9HD67 2058 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 LRP4O75096 1905 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 TICRRQ7Z2Z1 1910 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 MEIKINA0A087WXM9 373 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 TRBV5-5A0A0J9YX44 114 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SNRPGP15A8MWD9 76 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 CHURC1-FNTBB4DL54 471 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 XKRYO14609 159 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 TO15178 435 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 NOS1APO75052 506 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF254O75437 659 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 KHDRBS3O75525 346 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SLC25A12O75746 678 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 IFNA7P01567 189 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 IL5P05113 134 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GYPBP06028 91 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 TPOP07202 933 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ASAH2BP0C7U1 165 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SULT1A3P0DMM9 295 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SULT1A4P0DMN0 295 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 CPN1P15169 458 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 NME1P15531 152 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF24P17028 368 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PGCP20142 388 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PTNP21246 168 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GIFP27352 417 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 IL12BP29460 328 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GDNFP39905 211 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PBX2P40425 430 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PGDP52209 483 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ELAVL1Q15717 326 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 CLPPQ16740 277 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GSG1Q2KHT4 349 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 NDUFAF6Q330K2 333 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 CEP78Q5JTW2 689 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 C6orf183Q5T699 404 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 FAM27D1Q5T7N8 215 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 HLA-DQA1Q5Y7H0 255 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 FCRLBQ6BAA4 426 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 RPTNQ6XPR3 784 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SYT13Q7L8C5 426 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 LINGO2Q7L985 606 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SSX6Q7RTT6 188 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 MAMDC2Q7Z304 686 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 MISPQ8IVT2 679 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 TMEFF1Q8IYR6 380 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 C9orf62Q8N4C0 152 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 LSM14AQ8ND56 463 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 OR51Q1Q8NH59 317 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 OR5AK2Q8NH90 309 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF563Q8TA94 476 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PHOSPHO1Q8TCT1 267 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GPR148Q8TDV2 347 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PATE1Q8WXA2 126 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 DAZLQ92904 295 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 MIB2Q96AX9 1013 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 HAVCR1Q96D42 359 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 MMABQ96EY8 250 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ADAD1Q96M93 576 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GPR137Q96N19 417 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ZFP3Q96NJ6 502 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 INTS14Q96SY0 518 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 UTP23Q9BRU9 249 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms