RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HS3ST6Q96QI5 342 aa15.94■□□□□ 0.14
PDLIM2-215ENST00000456545 KCTD14Q9BQ13 255 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-215ENST00000456545 ALG2Q9H553 416 aa15.94■□□□□ 0.14
PDLIM2-215ENST00000456545 ADA2Q9NZK5 511 aa15.94■□□□□ 0.14
PDLIM2-215ENST00000456545 LRBAP50851 2863 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 PDZD2O15018 2839 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 OR5H1A6NKK0 313 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 CXCR6O00574 342 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 CLOCKO15516 846 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 SHOX2O60902 331 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 ZNF682O95780 498 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 BGLAPP02818 100 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 CD3EP07766 207 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 AHCYP23526 432 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 SELENOPP49908 381 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 CRYBA2P53672 197 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 ACKR1Q16570 336 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 ZNF704Q6ZNC4 412 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 EPHX4Q8IUS5 362 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 LURAP1LQ8IV03 231 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 FAM162AQ96A26 154 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 SEC14L4Q9UDX3 406 aa15.93■□□□□ 0.14
PDLIM2-215ENST00000456545 A0A1W2PPR1 153 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 ZNF587BE7ETH6 402 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 KPNA4O00629 521 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 NME4O00746 187 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 MT-ATP6P00846 226 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 UMPSP11172 480 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 MPGP29372 298 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 GSK3BP49841 420 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 MXRA7P84157 204 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 KLHL24Q6TFL4 600 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 LINC00114Q6XXX2 140 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 FKBP9P1Q75LS8 142 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 PIGWQ7Z7B1 504 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 SCAIQ8N9R8 606 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 POLR2J2Q9GZM3 115 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 PCDHAC1Q9H158 963 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 POLR2J3Q9H1A7 115 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 GMPR2Q9P2T1 348 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 RIMS3Q9UJD0 308 aa15.92■□□□□ 0.14
PDLIM2-215ENST00000456545 TACC2O95359 2948 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 ANKRD17O75179 2603 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 A0A1W2PR80 420 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 ZNF726A6NNF4 738 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 SLC43A1O75387 559 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 SERPINI2O75830 405 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 ATE1O95260 518 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 CH25HO95992 272 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 ITGA5P08648 1049 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 FOXG1P55316 489 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 LTBQ06643 244 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 PIN1Q13526 163 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 GABRA6Q16445 453 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 NCMAPQ5T1S8 102 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 HMBOX1Q6NT76 420 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 KLHL17Q6TDP4 642 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 GPR137CQ8N3F9 429 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 ADPRHL1Q8NDY3 354 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 OR5J2Q8NH18 312 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 PIGTQ969N2 578 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 MUS81Q96NY9 551 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 MOGAT1Q96PD6 335 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 FOXC2Q99958 501 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 SPAG4Q9NPE6 437 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 NANSQ9NR45 359 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 MRPL39Q9NYK5 338 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 RNF115Q9Y4L5 304 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 NOX1Q9Y5S8 564 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 ABCA4P78363 2273 aa15.91■□□□□ 0.14
PDLIM2-215ENST00000456545 LOC102725191A0A1B0GVB3 256 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 LRRN3E7EW58 273 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 C11orf98E9PRG8 122 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 MS4A18H0YCH9 400 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 OR5F1O95221 314 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 PLAUP00749 431 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 ADORA3P0DMS8 318 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 LOXP28300 417 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 PUDPQ08623 228 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 DEFB113Q30KQ7 82 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 MS4A18Q3C1V0 323 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 C8orf82Q6P1X6 216 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 C20orf204Q6ZNR8 217 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 PIK3C3Q8NEB9 887 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 C1orf162Q8NEQ5 155 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 AKAP1Q92667 903 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 HS6ST2Q96MM7 605 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 CCT8L2Q96SF2 557 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 CCL19Q99731 98 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 C1QTNF6Q9BXI9 259 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 SLC19A3Q9BZV2 496 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 TAGLN3Q9UI15 199 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 RCE1Q9Y256 329 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 AMDHD2Q9Y303 409 aa15.9■□□□□ 0.14
PDLIM2-215ENST00000456545 PLPP3O14495 311 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 UPK3AO75631 287 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 WNT11O96014 354 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 SERPINA1P01009 418 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 THY1P04216 161 aa15.89■□□□□ 0.13
PDLIM2-215ENST00000456545 IFNW1P05000 195 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms