RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 C1QL3Q5VWW1 255 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 UNQ9370/PRO34162Q6UXP9 181 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 HSDL2Q6YN16 418 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 RTL4Q6ZR62 310 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 VASH2Q86V25 355 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PAF1Q8N7H5 531 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PROKR2Q8NFJ6 384 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ACOT11Q8WXI4 607 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 ASB15Q8WXK1 588 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PROX1Q92786 737 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ZBTB8AQ96BR9 441 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 DMRTA2Q96SC8 542 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 NEURL2Q9BR09 285 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 POTEKPQ9BYX7 375 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TBL1XR1Q9BZK7 514 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 UCK2Q9BZX2 261 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 RNF167Q9H6Y7 350 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 BCO1Q9HAY6 547 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 MRPL39Q9NYK5 338 aaKnown RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 ST6GALNAC2Q9UJ37 374 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 BAG5Q9UL15 447 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 FAM215AQ9Y5M1 114 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 SIRT4Q9Y6E7 314 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 DSCAML1Q8TD84 2053 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 IGLV1-36A0A0B4J1U3 117 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 IGKV1D-43A0A0B4J1Z2 117 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ARPC3O15145 178 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 IFNW1P05000 195 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ITPKBP27987 946 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 MSX1P28360 303 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PSMD4P55036 377 aaKnown RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 DYNC1I2Q13409 638 aaKnown RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 COL28A1Q2UY09 1125 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PHC2Q8IXK0 858 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 GPR135Q8IZ08 494 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TEX19Q8NA77 164 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PSD4Q8NDX1 1056 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 MIB2Q96AX9 1013 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 RNF31Q96EP0 1072 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 CENPOQ9BU64 300 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TTTY12Q9BZ98 90 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PPIL3Q9H2H8 161 aaKnown RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 CRNNQ9UBG3 495 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 TBC1D24Q9ULP9 559 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 CFL2Q9Y281 166 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 WDR45Q9Y484 360 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ZFHX2Q9C0A1 2572 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 CDC14CA4D256 554 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CENPBD1B2RD01 187 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PLPP3O14495 311 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SMAD9O15198 467 aaKnown RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 GSTA4O15217 222 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 DNPH1O43598 174 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 RGS10O43665 173 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 AKAP8O43823 692 aaKnown RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 H1F0P07305 194 aaKnown RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 GKN3PP0CG01 181 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 TFPIP10646 304 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 UBL4AP11441 157 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 HOXC5Q00444 222 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF85Q03923 595 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 MESTQ5EB52 335 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF311Q5JNZ3 666 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PAQR6Q6TCH4 344 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 HMGN2P46Q86SG4 172 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CLVS1Q8IUQ0 354 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 SIRT6Q8N6T7 355 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 FAM83FQ8NEG4 500 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 RNF128Q8TEB7 428 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 MRGPRX4Q96LA9 322 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 TSPAN32Q96QS1 320 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 BBS4Q96RK4 519 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PIGQQ9BRB3 760 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CDCP1Q9H5V8 836 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ADGRL4Q9HBW9 690 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PNO1Q9NRX1 252 aaKnown RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 RHCGQ9UBD6 479 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF229Q9UJW7 825 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SLC7A7Q9UM01 511 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 GMPPBQ9Y5P6 360 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CELSR1Q9NYQ6 3014 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF670-ZNF695F2Z2N8 137 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 AQP7O14520 342 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SUSD5O60279 629 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ICAM2P13598 275 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 IGFBP2P18065 325 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CCNA2P20248 432 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ALAS2P22557 587 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 GADD45AP24522 165 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 AQP1P29972 269 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 HTR1FP30939 366 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SRD5A2P31213 254 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 DSCR4P56555 118 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 NCS1P62166 190 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SPIBQ01892 262 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 RAB40BQ12829 278 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 GPR50Q13585 617 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SOWAHCQ53LP3 525 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 C10orf128Q5T292 105 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 NXNL2Q5VZ03 156 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms