RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SPNS1Q9H2V7 528 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 PDE4DIPQ5VU43 2346 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 A0A0A6YYJ9 748 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 NPIPB15A6NHN6 443 aaPredicted RBP17.31■□□□□ 0.36
SHANK3-203ENST00000445220 ZMAT1Q5H9K5 638 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 KCTD11Q693B1 232 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 OR5AR1Q8NGP9 310 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 SLC38A5Q8WUX1 472 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 HPSE2Q8WWQ2 592 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 CDCA3Q99618 268 aaPredicted RBP17.31■□□□□ 0.36
SHANK3-203ENST00000445220 CDCA4Q9BXL8 241 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 SUSD2Q9UGT4 822 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 FTCDNL1E5RQL4 147 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 SLC16A7O60669 478 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 GPX5O75715 221 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 LCATP04180 440 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 GABRB1P18505 474 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 ANXA7P20073 488 aaKnown RBP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 LIX1LQ8IVB5 337 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 SKA3Q8IX90 412 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 OR13C2Q8NGS9 318 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 ASB11Q8WXH4 323 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 TMEM106AQ96A25 262 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 PLSCR3Q9NRY6 295 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 ARGFXA6NJG6 315 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 GABARAPH6UMI1 98 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 EEF1A1P5Q5VTE0 462 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 CST9LP1Q5W188 147 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 OR7E24Q6IFN5 339 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 PEX11GQ96HA9 241 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 APOBEC3BQ9UH17 382 aaKnown RBP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 MN1Q10571 1320 aaPredicted RBP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 H7C1Q1 480 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 SCGB2A1O75556 95 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 CPN1P15169 458 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 FBLP22087 321 aaKnown RBP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 AOAHP28039 575 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 CCR7P32248 378 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 TEKQ02763 1124 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 FAM111BQ6SJ93 734 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 DPPA4Q7L190 304 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 GPR34Q9UPC5 381 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 ACTL7AQ9Y615 435 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 SCAF4O95104 1147 aaKnown RBP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 OR2C1O95371 312 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 GPX2P18283 190 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 VIPR2P41587 438 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 KCNJ5P48544 419 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 AKR1C1Q04828 323 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 CNN3Q15417 329 aaKnown RBP17.3■□□□□ 0.36
SHANK3-203ENST00000445220 OR5L2Q8NGL0 311 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 OR13C9Q8NGT0 318 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 GAB2Q9UQC2 676 aa17.3■□□□□ 0.36
SHANK3-203ENST00000445220 EFNA3P52797 238 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 PRAMEF8Q5VWM4 474 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 PRAMEF7Q5VXH5 474 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 MBOAT2Q6ZWT7 520 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 OR6M1Q8NGM8 313 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 TANKQ92844 425 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 SLCO4A1Q96BD0 722 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 CASD1Q96PB1 797 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 LIN7BQ9HAP6 207 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 OMGP23515 440 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ITGB7P26010 798 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 TACR3P29371 465 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 IAH1Q2TAA2 248 aaPredicted RBP17.29■□□□□ 0.36
SHANK3-203ENST00000445220 SOWAHCQ53LP3 525 aaPredicted RBP17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ZBTB37Q5TC79 503 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 HSD17B11Q8NBQ5 300 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 YIPF6Q96EC8 236 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 EXOSC3Q9NQT5 275 aaKnown RBP17.29■□□□□ 0.36
SHANK3-203ENST00000445220 URGCP-MRPS24S4R325 110 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ZBTB42B2RXF5 422 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 F5H5K5 113 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 TPOP07202 933 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 RBM39Q14498 530 aaKnown RBP17.29■□□□□ 0.36
SHANK3-203ENST00000445220 RAET1LQ5VY80 246 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ZNF561Q8N587 486 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ARRDC2Q8TBH0 407 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 C20orf24Q9BUV8 137 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ANKRD19PQ9H560 264 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 TAF9BQ9HBM6 251 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 ZNF286AQ9HBT8 521 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 MOKQ9UQ07 419 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 LRIT2A6NDA9 550 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 SOCS6O14544 535 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 THAP3Q8WTV1 239 aaPredicted RBP17.29■□□□□ 0.36
SHANK3-203ENST00000445220 C22orf15Q8WYQ4 148 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 VPS25Q9BRG1 176 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 NDUFB11Q9NX14 153 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 STEAP1Q9UHE8 339 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 PRSS21Q9Y6M0 314 aa17.29■□□□□ 0.36
SHANK3-203ENST00000445220 OR13C7P0DN81 318 aa17.28■□□□□ 0.36
SHANK3-203ENST00000445220 BCDIN3DQ7Z5W3 292 aaKnown RBP17.28■□□□□ 0.36
SHANK3-203ENST00000445220 SLC41A2Q96JW4 573 aa17.28■□□□□ 0.36
SHANK3-203ENST00000445220 GPR174Q9BXC1 333 aa17.28■□□□□ 0.36
SHANK3-203ENST00000445220 HOXC13P31276 330 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms