RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MRPL39Q9NYK5 338 aaKnown RBP11.94□□□□□ -0.5
CPSF4-206ENST00000441580 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-206ENST00000441580 A0A1W2PQL4 384 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-206ENST00000441580 OR6C68A6NDL8 312 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 NPIPB13A6NJU9 1138 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 NPIPB4C9JG80 1138 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 LOC110117498-PIK3R3F6TDL0 507 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 GABRPO00591 440 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 XKRYO14609 159 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 FZD7O75084 574 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 SERPINI2O75830 405 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 KLF7O75840 302 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-206ENST00000441580 STK17BO94768 372 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 DKK1O94907 266 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 CDRT1O95170 752 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 OR6A2O95222 327 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 RAB40ALP0C0E4 278 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 BLVRAP53004 296 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 PPP5CP53041 499 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 NUBP1P53384 320 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 FABP5Q01469 135 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 LTBQ06643 244 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 FOXF1Q12946 379 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 CDONQ4KMG0 1287 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 MESTQ5EB52 335 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 SPANXN2Q5MJ10 180 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 FAM69BQ5VUD6 431 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 VASNQ6EMK4 673 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 POMZP3Q6PJE2 187 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 B3GLCTQ6Y288 498 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 C16orf47Q6ZP98 133 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-206ENST00000441580 VASH1Q7L8A9 365 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-206ENST00000441580 FAM220AQ7Z4H9 259 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 ADGRG3Q86Y34 549 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 MARCH9Q86YJ5 346 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 ZFP41Q8N8Y5 198 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 OR10G3Q8NGC4 313 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 PMEPA1Q969W9 287 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 WDFY2Q96P53 400 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 TAAR9Q96RI9 348 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 CDC6Q99741 560 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 KLHDC3Q9BQ90 382 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 MESP1Q9BRJ9 268 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 ALG12Q9BV10 488 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 TMED9Q9BVK6 235 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 SNTG1Q9NSN8 517 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 FBXL4Q9UKA2 621 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 B3GALT1Q9Y5Z6 326 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 HS3ST3B1Q9Y662 390 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 CPAMD8Q8IZJ3 1885 aa11.93□□□□□ -0.5
CPSF4-206ENST00000441580 ZDBF2Q9HCK1 2354 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 MPDZO75970 2070 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 NSG1A0A0A6YYJ2 146 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ISPDA4D126 451 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 HSPB2A8KAH6 182 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 C17orf51A8MQB3 221 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 PHYHO14832 338 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 PLPP2O43688 288 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ZNF354AO60765 605 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 DLGAP3O95886 979 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 SERPINA3P01011 423 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 TFP02787 698 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 CD1AP06126 327 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 GRPRP30550 384 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 RPS19P39019 145 aaKnown RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 NAA10P41227 235 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 GBX2P52951 348 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 HNRNPA0Q13151 305 aaKnown RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 HSPB2Q16082 182 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ZNF181Q2M3W8 571 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 PLPPR5Q32ZL2 321 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 CCDC58Q4VC31 144 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 C3orf33Q6P1S2 294 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 C6orf15Q6UXA7 325 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 PAMR1Q6UXH9 720 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 NDUFAF7Q7L592 441 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 MFSD8Q8NHS3 518 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 NEIL3Q8TAT5 605 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 CHPT1Q8WUD6 406 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 SLC25A43Q8WUT9 341 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ATOH1Q92858 354 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 TMEM203Q969S6 136 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ZNF524Q96C55 264 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 IMMP1LQ96LU5 166 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 TM9SF2Q99805 663 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 FAM117AQ9C073 453 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ISG20L2Q9H9L3 353 aaKnown RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 GALNT9Q9HCQ5 603 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 SERINC1Q9NRX5 453 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 TBCCD1Q9NVR7 557 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 ZMIZ1Q9ULJ6 1067 aa11.92□□□□□ -0.5
CPSF4-206ENST00000441580 YARS2Q9Y2Z4 477 aaKnown RBP11.92□□□□□ -0.5
CPSF4-206ENST00000441580 A0A087WZY1 265 aa11.91□□□□□ -0.5
CPSF4-206ENST00000441580 CCDC187A0A096LP49 1063 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms