RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 C10orf53Q8N6V4 93 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 PLPPR2Q96GM1 343 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 SLC41A3Q96GZ6 507 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 SLC19A3Q9BZV2 496 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 ALG2Q9H553 416 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 CCM2LQ9NUG4 571 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-207ENST00000435455 SLC7A7Q9UM01 511 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 RCE1Q9Y256 329 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 ITPR3Q14573 2671 aa14.33□□□□□ -0.12
SMPD4-207ENST00000435455 CADP27708 2225 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 PDLIM1O00151 329 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 CXCR6O00574 342 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 AKAP8O43823 692 aaKnown RBP14.32□□□□□ -0.12
SMPD4-207ENST00000435455 KRT33AO76009 404 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 OR5F1O95221 314 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 ITGA5P08648 1049 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 NQO1P15559 274 aaKnown RBP14.32□□□□□ -0.12
SMPD4-207ENST00000435455 TNFRSF1BP20333 461 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 CBLP22681 906 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 MPGP29372 298 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 GSK3BP49841 420 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 SELENOWP63302 87 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 DEF8Q6ZN54 512 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 EPHX4Q8IUS5 362 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 ANKS4BQ8N8V4 417 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 C1orf162Q8NEQ5 155 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-207ENST00000435455 MBD6Q96DN6 1003 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 TPD52L3Q96J77 140 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 HS3ST6Q96QI5 342 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 KCTD14Q9BQ13 255 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-207ENST00000435455 ESRP2Q9H6T0 727 aaKnown RBP14.32□□□□□ -0.12
SMPD4-207ENST00000435455 MRPL39Q9NYK5 338 aaKnown RBP14.32□□□□□ -0.12
SMPD4-207ENST00000435455 ABCD2Q9UBJ2 740 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 SEC14L4Q9UDX3 406 aa14.32□□□□□ -0.12
SMPD4-207ENST00000435455 DSCAMO60469 2012 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 RAD51DO75771 328 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 ATE1O95260 518 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 THY1P04216 161 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 PTNP21246 168 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 SELENOPP49908 381 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 ART1P52961 327 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 CLDN17P56750 224 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 TAS2R41P59536 307 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 LTBQ06643 244 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 PMS2P3Q13401 168 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 TESK1Q15569 626 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 GABRA6Q16445 453 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 C1QTNF12Q5T7M4 302 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 NIPAL3Q6P499 406 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 WDR88Q6ZMY6 472 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF704Q6ZNC4 412 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-207ENST00000435455 TSPYL5Q86VY4 417 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-207ENST00000435455 KDM8Q8N371 416 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 MOGAT1Q96PD6 335 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 CCT8L2Q96SF2 557 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 FOXC2Q99958 501 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 TMEM204Q9BSN7 226 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF426Q9BUY5 554 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 LINC00470Q9BZP3 86 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 AMBRA1Q9C0C7 1298 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 UBTD1Q9HAC8 227 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 SPAG4Q9NPE6 437 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 GMPR2Q9P2T1 348 aaKnown RBP14.31□□□□□ -0.12
SMPD4-207ENST00000435455 B3GAT1Q9P2W7 334 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 RIMS3Q9UJD0 308 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 HIVEP1P15822 2718 aa14.31□□□□□ -0.12
SMPD4-207ENST00000435455 F8P00451 2351 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF587BE7ETH6 402 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 MS4A18H0YCH9 400 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 SLC43A1O75387 559 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF432O94892 652 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 THRBP10828 461 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 IFNA8P32881 189 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 RBM34P42696 430 aaKnown RBP14.3□□□□□ -0.12
SMPD4-207ENST00000435455 OR1E2P47887 323 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 FOXG1P55316 489 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-207ENST00000435455 PUDPQ08623 228 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 ACKR1Q16570 336 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 MS4A18Q3C1V0 323 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 NCMAPQ5T1S8 102 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 C20orf204Q6ZNR8 217 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 LURAP1LQ8IV03 231 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 UEVLDQ8IX04 471 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 C17orf78Q8N4C9 275 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 OR5J2Q8NH18 312 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 MUS81Q96NY9 551 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 ALPK1Q96QP1 1244 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 FKRPQ9H9S5 495 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 TAGLN3Q9UI15 199 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 RNF115Q9Y4L5 304 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 RAI1Q7Z5J4 1906 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-207ENST00000435455 ALPK2Q86TB3 2170 aa14.3□□□□□ -0.12
SMPD4-207ENST00000435455 LRRN3E7EW58 273 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 PLPP3O14495 311 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 TRAF3IP2O43734 574 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-207ENST00000435455 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-207ENST00000435455 ZNF682O95780 498 aa14.29□□□□□ -0.12
SMPD4-207ENST00000435455 CD3EP07766 207 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms