RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 PRAMEF2O60811 474 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 CTNSO60931 367 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 CSTAP01040 98 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 APEHP13798 732 aaKnown RBP10.34□□□□□ -0.75
USP4-205ENST00000431357 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
USP4-205ENST00000431357 DPP4P27487 766 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 PSMB10P40306 273 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 MNDAP41218 407 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 SLC25A1P53007 311 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 RPS4XP62701 263 aaKnown RBP10.34□□□□□ -0.75
USP4-205ENST00000431357 SCRN3Q0VDG4 424 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 STX4Q12846 297 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 ESPNLQ6ZVH7 1005 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 OR4N2Q8NGD1 307 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 GPBAR1Q8TDU6 330 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 ADAMTS18Q8TE60 1221 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 FCAMRQ8WWV6 532 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 OIT3Q8WWZ8 545 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 ARSGQ96EG1 525 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 LCORQ96JN0 433 aaPredicted RBP10.34□□□□□ -0.75
USP4-205ENST00000431357 AUNIPQ9H7T9 357 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 EIF3KQ9UBQ5 218 aaKnown RBP10.34□□□□□ -0.75
USP4-205ENST00000431357 HS3ST3A1Q9Y663 406 aa10.34□□□□□ -0.75
USP4-205ENST00000431357 A0A1B0GUH1 482 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 OR6C68A6NDL8 312 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 IMPA2O14732 288 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 LDOC1O95751 146 aaPredicted RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 RNH1P13489 461 aaKnown RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 POLR2GP62487 172 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP4-205ENST00000431357 IGLV3-21P80748 117 aaPredicted RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 HTRA3P83110 453 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 LGALSLQ3ZCW2 172 aaPredicted RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 ZNF684Q5T5D7 378 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 OLFML2AQ68BL7 652 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 CORO6Q6QEF8 472 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 FAM220AQ7Z4H9 259 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ZNF595Q8IYB9 648 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 OR8H3Q8N146 312 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 RCBTB1Q8NDN9 531 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 OR6K6Q8NGW6 343 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 DERL3Q96Q80 235 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ORAI3Q9BRQ5 295 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 RXFP3Q9NSD7 469 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 FBXL3Q9UKT7 428 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 RCE1Q9Y256 329 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ADAM18Q9Y3Q7 739 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ETV7Q9Y603 341 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 GNB5O14775 395 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 PNMTP11086 282 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 LCN1P31025 176 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 GRK6P43250 576 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 SNTA1Q13424 505 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 HES5Q5TA89 166 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 GPR139Q6DWJ6 353 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ARMC6Q6NXE6 501 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 FCRLAQ7L513 359 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 SLC16A9Q7RTY1 509 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 JAZF1Q86VZ6 243 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 LSRQ86X29 649 aaPredicted RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 IZUMO1Q8IYV9 350 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 SHISA5Q8N114 240 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 OR9A4Q8NGU2 314 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 LRRC20Q8TCA0 184 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 LIPHQ8WWY8 451 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 NSMAFQ92636 917 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 C3orf49Q96BT1 292 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 GFI1Q99684 422 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 RPP25Q9BUL9 199 aaKnown RBP10.33□□□□□ -0.76
USP4-205ENST00000431357 ALG12Q9BV10 488 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 SEMA6CQ9H3T2 930 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 IGFLR1Q9H665 355 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 ZC4H2Q9NQZ6 224 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 C2orf42Q9NWW7 574 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 GLTPQ9NZD2 209 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
USP4-205ENST00000431357 TUBAL3A6NHL2 446 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 KHDRBS3O75525 346 aaKnown RBP10.32□□□□□ -0.76
USP4-205ENST00000431357 ZNF432O94892 652 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ZNF81P51508 661 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 SCAND1P57086 179 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ERVK-25P63136 954 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 FAM53BQ14153 422 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP4-205ENST00000431357 Q499Y3 187 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 LINC01590Q5TEZ4 76 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 SFRP4Q6FHJ7 346 aaPredicted RBP10.32□□□□□ -0.76
USP4-205ENST00000431357 LEG1Q6P5S2 330 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 SEZ6L2Q6UXD5 910 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 LRRN1Q6UXK5 716 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 NPSR1Q6W5P4 371 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 TMEM151BQ8IW70 566 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 PM20D2Q8IYS1 436 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ARHGEF39Q8N4T4 335 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 SPICQ8N5J4 248 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 ZNF433Q8N7K0 673 aaPredicted RBP10.32□□□□□ -0.76
USP4-205ENST00000431357 BEST4Q8NFU0 473 aa10.32□□□□□ -0.76
USP4-205ENST00000431357 OR11G2Q8NGC1 345 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms