RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 A0A1W2PPM1 405 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 H0YIG0 161 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CLDN7O95471 211 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 SEMA4FO95754 770 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 IFNW1P05000 195 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CFHP08603 1231 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FDXRP22570 491 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CD27P26842 260 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 LHX1P48742 406 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 EVX1P49640 407 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TMBIM6P55061 237 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ELLP55199 621 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HSF1Q00613 529 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 IRF9Q00978 393 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CRHR2Q13324 411 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MICBQ29980 383 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MFSD14BQ5SR56 506 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF687Q8N1G0 1237 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FTMTQ8N4E7 242 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 METTL27Q8N6F8 245 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TMEM159Q96B96 161 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CLSTN3Q9BQT9 956 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 NICN1Q9BSH3 213 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 QTRT1Q9BXR0 403 aaKnown RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 LHPPQ9H008 270 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 DHX35Q9H5Z1 703 aaKnown RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FRRS1LQ9P0K9 344 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MARCH4Q9P2E8 410 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CNTN6Q9UQ52 1028 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PREX1Q8TCU6 1659 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MAP1LC3B2A6NCE7 125 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 SLC17A3O00476 420 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 WNT9AO14904 365 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 KLRC4O43908 158 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 OR6A2O95222 327 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MMP1P03956 469 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HTR1AP08908 422 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HOXC4P09017 264 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CSNK2A2P19784 350 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 KDELR1P24390 212 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HTR2CP28335 458 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 SLC6A8P48029 635 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 SLC37A1P57057 533 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CSNK1G2P78368 415 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 GTF2BQ00403 316 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PGM5Q15124 567 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 NR0B2Q15466 257 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TEAD2Q15562 447 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PCK2Q16822 640 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 N4BP2L1Q5TBK1 243 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FBXW9Q5XUX1 488 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 AADACL2Q6P093 401 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 APTXQ7Z2E3 356 aaKnown RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 OR4N5Q8IXE1 308 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 KLHDC8BQ8IXV7 354 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 GTPBP8Q8N3Z3 284 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 AQP11Q8NBQ7 271 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 OR4M1Q8NGD0 313 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 C1QTNF2Q9BXJ5 285 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MAP1LC3BQ9GZQ8 125 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 XYLT2Q9H1B5 865 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 C20orf85Q9H1P6 137 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 KIR3DX1Q9H7L2 352 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 WDR76Q9H967 626 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RRAGCQ9HB90 399 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MSL2Q9HCI7 577 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PCYOX1Q9UHG3 505 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 FBXO5Q9UKT4 447 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 C7orf72A4D263 438 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 SHISA7A6NL88 538 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 SLC16A7O60669 478 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 P04436 131 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PSMB5P28074 263 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 OR12D2P58182 307 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 PRKCDQ05655 676 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MED27Q6P2C8 311 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HACD2Q6Y1H2 254 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ZCCHC23Q6ZST2 131 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CDC20BQ86Y33 519 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 MS4A15Q8N5U1 240 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 EID2Q8N6I1 236 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RHOXF1Q8NHV9 184 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ABHD17AQ96GS6 310 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CDKN2AIPNLQ96HQ2 116 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF778Q96MU6 729 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 KREMEN1Q96MU8 473 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 TPSD1Q9BZJ3 242 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 OR51I2Q9H344 312 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 DPAGT1Q9H3H5 408 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CST9LQ9H4G1 147 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RNF121Q9H920 327 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ACP6Q9NPH0 428 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 HEYLQ9NQ87 328 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 CISHQ9NSE2 258 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RASL12Q9NYN1 266 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 METTL1Q9UBP6 276 aaKnown RBP4.94□□□□□ -1.62
PTPN4-203ENST00000430976 EPHA6Q9UF33 1036 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 RAB22AQ9UL26 194 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 NEU3Q9UQ49 428 aa4.94□□□□□ -1.62
PTPN4-203ENST00000430976 ARL5AQ9Y689 179 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms