RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 A0A1B0GTW7 788 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 CLDN1O95832 211 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ITGAMP11215 1152 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 S100A7P31151 101 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ILKQ13418 452 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ATPAF1Q5TC12 328 aaPredicted RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 CPNE4Q96A23 557 aaPredicted RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 RAB3CQ96E17 227 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 LIN7BQ9HAP6 207 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 POM121CA8CG34 1229 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 NUPL2O15504 423 aaKnown RBP14.27□□□□□ -0.12
PTPRF-206ENST00000429895 AGFG1P52594 562 aaKnown RBP14.27□□□□□ -0.12
PTPRF-206ENST00000429895 GK3PQ14409 553 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 BHLHE23Q8NDY6 225 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 OR13H1Q8NG92 308 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 LIPHQ8WWY8 451 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 ADAMTS14Q8WXS8 1223 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 TFAP2CQ92754 450 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 LCORQ96JN0 433 aaPredicted RBP14.27□□□□□ -0.12
PTPRF-206ENST00000429895 USP22Q9UPT9 525 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 NALCNQ8IZF0 1738 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 hCG_1809904A0A1W2PP81 198 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 A0A1W2PPE2 198 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 A0A1W2PR64 198 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 A0A1W2PRV1 198 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.12
PTPRF-206ENST00000429895 BLVRBP30043 206 aaPredicted RBP14.27□□□□□ -0.12
PTPRF-206ENST00000429895 GDPGP1Q6ZNW5 385 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 GAREM2Q75VX8 874 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 PIGTQ969N2 578 aa14.27□□□□□ -0.12
PTPRF-206ENST00000429895 TINAGL1Q9GZM7 467 aaPredicted RBP14.27□□□□□ -0.12
PTPRF-206ENST00000429895 H0Y8G0 127 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 TM4SF4P48230 202 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF691Q5VV52 312 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 OR5AS1Q8N127 324 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 UCN3Q969E3 161 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 SLC19A3Q9BZV2 496 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 KLRC4-KLRK1H3BQV0 150 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 C17orf67Q0P5P2 114 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 RPL22L1Q6P5R6 122 aaKnown RBP14.27□□□□□ -0.13
PTPRF-206ENST00000429895 MUL1Q969V5 352 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 AGPAT4Q9NRZ5 378 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 EMX1Q04741 257 aaPredicted RBP14.27□□□□□ -0.13
PTPRF-206ENST00000429895 SMN1Q16637 294 aaKnown RBP14.27□□□□□ -0.13
PTPRF-206ENST00000429895 GIMAP1Q8WWP7 306 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 RNF32Q9H0A6 362 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 ATP13A2Q9NQ11 1180 aa14.27□□□□□ -0.13
PTPRF-206ENST00000429895 TXNL4BQ9NX01 149 aaKnown RBP14.27□□□□□ -0.13
PTPRF-206ENST00000429895 PUS1Q9Y606 427 aaKnown RBP eCLIP14.27□□□□□ -0.13
PTPRF-206ENST00000429895 C17orf112F2Z3M2 114 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 IMPA1P29218 277 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 RTL10Q7L3V2 364 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 NOXA1Q86UR1 476 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 FJX1Q86VR8 437 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 LANCL2Q9NS86 450 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 ACSS1Q9NUB1 689 aaPredicted RBP14.26□□□□□ -0.13
PTPRF-206ENST00000429895 EMCNQ9ULC0 261 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 PADI1Q9ULC6 663 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 PCDHGA5Q9Y5G8 931 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 MON2Q7Z3U7 1717 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 TRAV36DV7A0A075B6V5 113 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 H7C1Q1 480 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SCAF4O95104 1147 aaKnown RBP14.26□□□□□ -0.13
PTPRF-206ENST00000429895 B3GALT4O96024 378 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 MFRPQ9BY79 579 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 PPA2Q9H2U2 334 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SEMA6CQ9H3T2 930 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 MRPS2Q9Y399 296 aaKnown RBP14.26□□□□□ -0.13
PTPRF-206ENST00000429895 GABARAPH6UMI1 98 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 GABARAPO95166 117 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 WNT11O96014 354 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SERPINF1P36955 418 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 GSK3AP49840 483 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 P2RX1P51575 399 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 LYPD4Q6UWN0 246 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SYT9Q86SS6 491 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 OR56B1Q8NGI3 324 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 HRASLS5Q96KN8 279 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 CNTNAP3Q9BZ76 1288 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 FAM208AQ9UK61 1670 aaKnown RBP14.26□□□□□ -0.13
PTPRF-206ENST00000429895 ARNTLO00327 626 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 P2RX6O15547 441 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 CNIH1O95406 144 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 GNB1P62873 340 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 FRMPD2BQ6IN97 320 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 OGFOD3Q6PK18 319 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SLC46A3Q7Z3Q1 461 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 ZFPM2Q8WW38 1151 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 TSSK2Q96PF2 358 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 ATOH8Q96SQ7 321 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 NRSN2Q9GZP1 204 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 KCND3Q9UK17 655 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 SULT1C2O00338 296 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 BCKDHBP21953 392 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 CAMK2BQ13554 666 aa14.26□□□□□ -0.13
PTPRF-206ENST00000429895 TBC1D28Q2M2D7 210 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms