RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SYNGR3O43761 229 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TFP02787 698 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 VIMP08670 466 aaKnown RBP10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ADRA2AP08913 450 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CRATP43155 626 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SELENOPP49908 381 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TMEM33P57088 247 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ARF1P84077 181 aaKnown RBP10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FAM174BQ3ZCQ3 159 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF311Q5JNZ3 666 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RINLQ6ZS11 566 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HMGN2P46Q86SG4 172 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SVOPLQ8N434 492 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ANKFN1Q8N957 763 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CCDC115Q96NT0 180 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 OXGR1Q96P68 337 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC38A1Q9H2H9 487 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 DENND2DQ9H6A0 471 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RMND5AQ9H871 391 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 REV1Q9UBZ9 1251 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF346Q9UL40 294 aaKnown RBP10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 POFUT2Q9Y2G5 429 aa10.64□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZANQ9Y493 2812 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZC3H12DA2A288 527 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RPL36A-HNRNPH2H7BZ11 118 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 M0R233 179 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NR5A2O00482 541 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RFXANKO14593 260 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 AIM2O14862 343 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 BIRC5O15392 142 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LILRA1O75019 489 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF432O94892 652 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 IGKV3-15P01624 115 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 IGLV1-44P01699 117 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SERPINE1P05121 402 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CFPP27918 469 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 LIMS1P48059 325 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ABCE1P61221 599 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TEKQ02763 1124 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 POU3F1Q03052 451 aaPredicted RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SNTB2Q13425 540 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MOGQ16653 247 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MMEL1Q495T6 779 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SPANXN4Q5MJ08 99 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ATG16L1Q676U5 607 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GLB1L3Q8NCI6 653 aaPredicted RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RDH5Q92781 318 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ALKBH3Q96Q83 286 aaPredicted RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RBM4Q9BWF3 364 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF416Q9BWM5 594 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PLA2G12AQ9BZM1 189 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PCDHB10Q9UN67 800 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MXRA5Q9NR99 2828 aa10.63□□□□□ -0.71
HLA-DQB3-203ENST00000425319 A0A0G2JPF8 293 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC22A23A1A5C7 686 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CDHR4A6H8M9 788 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF726A6NNF4 738 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HNRNPCL2B2RXH8 293 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HNRNPCL3B7ZW38 293 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HNRNPCL1O60812 293 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 UPK3AO75631 287 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RAB36O95755 333 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 BCL10O95999 233 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 IL6P05231 212 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GKN3PP0CG01 181 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 HNRNPCL4P0DMR1 293 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CD79AP11912 226 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ACHEP22303 614 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TUBA1BP68363 451 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TUBA4AP68366 448 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 BNIP2Q12982 314 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CCNIQ14094 377 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GSG1Q2KHT4 349 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FAHD2BQ6P2I3 314 aaPredicted RBP10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 DEF8Q6ZN54 512 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TUBA1AQ71U36 451 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GSPT2Q8IYD1 628 aaKnown RBP10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 OR51F2Q8NH61 342 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC38A4Q969I6 547 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TMEM186Q96B77 213 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FAHD2AQ96GK7 314 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SPATA9Q9BWV2 254 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 RAD21L1Q9H4I0 556 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 SLC52A3Q9NQ40 469 aa10.62□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ALPK2Q86TB3 2170 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 TRAV20A0A0B4J274 112 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 IGHV2OR16-5A0A0B4J2B6 119 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 WDR91A4D1P6 747 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 ZNF99A8MXY4 864 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 C5orf58C9J3I9 102 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 FRS3O43559 492 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 BCAS1O75363 584 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 MT-ND5P03915 603 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 PNMTP11086 282 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NQO1P15559 274 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 NR4A1P22736 598 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CALCRP30988 508 aa10.61□□□□□ -0.71
HLA-DQB3-203ENST00000425319 GLRXP35754 106 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms