RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ACVR2AP27037 513 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SDHAP31040 664 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SFTPDP35247 375 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 AQP2P41181 271 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 MTNR1AP48039 350 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CLK1P49759 484 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ST13P50502 369 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SOX8P57073 446 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 FXYD6P3P58550 94 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 GPR85P60893 370 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RAP1BP61224 184 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RAP1AP62834 184 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ACTC1P68032 377 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ACTA1P68133 377 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CSNK2A1P68400 391 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PLGLB1Q02325 96 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TLE3Q04726 772 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 EGR4Q05215 589 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RPL18Q07020 188 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PUDPQ08623 228 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 POU4F2Q12837 409 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 MYBPHQ13203 477 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PMS2P3Q13401 168 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TMED1Q13445 227 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 C1DQ13901 141 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CRMP1Q14194 572 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 OR7A5Q15622 319 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SMN1Q16637 294 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 GLYR1Q49A26 553 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NADK2Q4G0N4 442 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 EMC4Q5J8M3 183 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SLC25A30Q5SVS4 291 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF468Q5VIY5 522 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ACSM5Q6NUN0 579 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 DNM1P34Q6PK57 102 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 KCTD8Q6ZWB6 473 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF367Q7RTV3 350 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 IGFN1Q86VF2 1251 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ADGRG3Q86Y34 549 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 FAM26EQ8N5C1 309 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 WDSUB1Q8N9V3 476 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SDR9C7Q8NEX9 313 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ATP6V1C2Q8NEY4 427 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 OR2M7Q8NG81 312 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 OR14L1PQ8NHC6 308 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 MFSD8Q8NHS3 518 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF417Q8TAU3 575 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RORBQ92753 470 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 FGF11Q92914 225 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TAAR8Q969N4 342 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 SLC25A36Q96CQ1 311 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RASD2Q96D21 266 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RNFT2Q96EX2 444 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 MRPL48Q96GC5 212 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 KLHL15Q96M94 604 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF582Q96NG8 517 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 OR5B2Q96R09 309 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF587Q96SQ5 575 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 KLHDC3Q9BQ90 382 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PTDSS2Q9BVG9 487 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 MND1Q9BWT6 205 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 POTEKPQ9BYX7 375 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RACGAP1Q9H0H5 632 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 DUSP21Q9H596 190 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TMEM185BQ9H7F4 350 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZFP64Q9NPA5 681 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 HINT3Q9NQE9 182 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 INIPQ9NRY2 104 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PAK1IP1Q9NWT1 392 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CHCHD3Q9NX63 227 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 STMN3Q9NZ72 180 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NDUFA13Q9P0J0 144 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 H2AFY2Q9P0M6 372 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PSORS1C1Q9UIG5 152 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPA1Q9UND3 350 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 GPR52Q9Y2T5 361 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 EXOSC1Q9Y3B2 195 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 MED12Q93074 2177 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF407Q9C0G0 2248 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PIEZO1Q92508 2521 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 OR2M5A3KFT3 312 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 LIPT2A6NK58 231 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 A6NL46 340 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SHISA8B8ZZ34 492 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 FTCDNL1E5RQL4 147 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PTGES3LE9PB15 166 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 C11orf98E9PRG8 122 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 KLRC4-KLRK1H3BQV0 150 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 LINC01387J3KSC0 135 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 IMPA2O14732 288 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 NKX2-8O15522 239 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SEC14L5O43304 696 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 FZD7O75084 574 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 NEURL1O76050 574 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PMS2P2O95744 297 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 F10P00742 488 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 HTR1AP08908 422 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 CNR1P21554 472 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms