RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 LIMS1P48059 325 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 ASCL1P50553 236 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 SIRPAP78324 504 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 ZP4Q12836 540 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 PMS2P3Q13401 168 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 ZSCAN26Q16670 478 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 FGD3Q5JSP0 725 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 OR2T5Q6IEZ7 315 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 HIST3H2AQ7L7L0 130 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 RRM2BQ7LG56 351 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 CDK20Q8IZL9 346 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 OR2T29Q8NH02 315 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 HIST1H2ACQ93077 130 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 TMEM45BQ96B21 275 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 DUS3LQ96G46 650 aaKnown RBP17.6■□□□□ 0.41
FAM3A-207ENST00000416319 OXGR1Q96P68 337 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 PSMG3-AS1Q96PY0 264 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 RAB3IPQ96QF0 476 aaPredicted RBP17.6■□□□□ 0.41
FAM3A-207ENST00000416319 KRCC1Q9NPI7 259 aaPredicted RBP17.6■□□□□ 0.41
FAM3A-207ENST00000416319 B3GAT1Q9P2W7 334 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 PROCRQ9UNN8 238 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 FLVCR1Q9Y5Y0 555 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 ARHGAP21Q5T5U3 1957 aa17.6■□□□□ 0.41
FAM3A-207ENST00000416319 SH3PXD2BA1X283 911 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 A8MXE2 369 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 TSPAN19P0C672 248 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 IFI30P13284 250 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 NQO1P15559 274 aaKnown RBP17.59■□□□□ 0.41
FAM3A-207ENST00000416319 FUT1P19526 365 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 LSM11P83369 360 aaKnown RBP eCLIP17.59■□□□□ 0.41
FAM3A-207ENST00000416319 TFF3Q07654 80 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 PUDPQ08623 228 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 ANKDD1AQ495B1 522 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 TBPL2Q6SJ96 375 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 TMPRSS11FQ6ZWK6 438 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 CREB3L2Q70SY1 520 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 PXKQ7Z7A4 578 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 GPAT4Q86UL3 456 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 LINC00471Q8N535 108 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 OR52J3Q8NH60 311 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 LRRC46Q96FV0 321 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 RSRC1Q96IZ7 334 aaKnown RBP17.59■□□□□ 0.41
FAM3A-207ENST00000416319 ALPK1Q96QP1 1244 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 UCK2Q9BZX2 261 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 PARPBPQ9NWS1 579 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 SEC14L4Q9UDX3 406 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 FOXD3Q9UJU5 478 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-207ENST00000416319 TMCC3Q9ULS5 477 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 LYVE1Q9Y5Y7 322 aa17.59■□□□□ 0.41
FAM3A-207ENST00000416319 FAM90A27PA6NNH2 459 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 MS4A18H0YCH9 400 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 PIP5K1CO60331 668 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 FKBP6O75344 327 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 CNOT4O95628 575 aaKnown RBP17.58■□□□□ 0.4
FAM3A-207ENST00000416319 CBLP22681 906 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 IFNGR2P38484 337 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 SLC9A3P48764 834 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 ACTR3P61158 418 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 FOXD4Q12950 439 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-207ENST00000416319 CCNIQ14094 377 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 SEC23BQ15437 767 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 MS4A18Q3C1V0 323 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 NUFIP2Q7Z417 695 aaKnown RBP17.58■□□□□ 0.4
FAM3A-207ENST00000416319 EPHX4Q8IUS5 362 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 LRRC17Q8N6Y2 441 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 ZIC4Q8N9L1 334 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 OR4K5Q8NGD3 323 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 OR4C15Q8NGM1 316 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 SLCO4A1Q96BD0 722 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 TAS2R5Q9NYW4 299 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 NOSIPQ9Y314 301 aaKnown RBP17.58■□□□□ 0.4
FAM3A-207ENST00000416319 NOX1Q9Y5S8 564 aa17.58■□□□□ 0.4
FAM3A-207ENST00000416319 MED12LQ86YW9 2145 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 EEF1E1-BLOC1S5C9J1V9 151 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 TNFRSF11BO00300 401 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 EEF1E1O43324 174 aaKnown RBP17.57■□□□□ 0.4
FAM3A-207ENST00000416319 OR6A2O95222 327 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 ZNF43P17038 809 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 MAKP20794 623 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 OMPP47874 163 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 OR3A2P47893 321 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 TFAP2EQ6VUC0 442 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 NHLRC1Q6VVB1 395 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 NANOGNBQ7Z5D8 188 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 STK32CQ86UX6 486 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 RNASE6Q93091 150 aaKnown RBP17.57■□□□□ 0.4
FAM3A-207ENST00000416319 REEP1Q9H902 201 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 ARMC1Q9NVT9 282 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 HIF3AQ9Y2N7 669 aa17.57■□□□□ 0.4
FAM3A-207ENST00000416319 ADGRG4Q8IZF6 3080 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 NKX2-6A6NCS4 301 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 EFCAB9A8MZ26 197 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 MRPL33O75394 65 aaKnown RBP17.56■□□□□ 0.4
FAM3A-207ENST00000416319 SMNDC1O75940 238 aaKnown RBP eCLIP17.56■□□□□ 0.4
FAM3A-207ENST00000416319 CLDN1O95832 211 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 HPRP00739 348 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 CST1P01037 141 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 ADORA3P0DMS8 318 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 UQCRC1P31930 480 aa17.56■□□□□ 0.4
FAM3A-207ENST00000416319 RPS4XP62701 263 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms