RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 HLA-DOBP13765 273 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CTSSP25774 331 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 UQCRC1P31930 480 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PER3P56645 1201 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SMIM11AP58511 58 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FXYD6P3P58550 94 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RPS4XP62701 263 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PDK3Q15120 406 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RNPS1Q15287 305 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 POU4F3Q15319 338 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 HSPB2Q16082 182 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR2A2Q6IF42 318 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PGBD2Q6P3X8 592 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MTFR2Q6P444 385 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TMPRSS11FQ6ZWK6 438 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 H1FNTQ75WM6 255 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FAM214BQ7L5A3 538 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MAMDC2Q7Z304 686 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 BTLAQ7Z6A9 289 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 EPHX4Q8IUS5 362 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FAM26EQ8N5C1 309 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 C10orf53Q8N6V4 93 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SCAIQ8N9R8 606 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR9Q2Q8NGE9 314 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR13C2Q8NGS9 318 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PIGXQ8TBF5 258 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF775Q96BV0 537 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SDCCAG3Q96C92 435 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 STARD4Q96DR4 205 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FAM46AQ96IP4 442 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ASPNQ9BXN1 380 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KLHL4Q9C0H6 718 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FANCFQ9NPI8 374 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NANSQ9NR45 359 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KLHL9Q9P2J3 617 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FLVCR1Q9Y5Y0 555 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 U3KQV3 271 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LRRK2Q5S007 2527 aa11.02□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF724A8MTY0 619 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CLOCKO15516 846 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AGFG2O95081 481 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IL18BPO95998 194 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CRHP06850 196 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HOXB6P17509 224 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CHRNB4P30926 498 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PMS2P3Q13401 168 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MFSD13AQ14CX5 517 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ATP6AP1Q15904 470 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ANKRD34AQ69YU3 496 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MRGPRGQ86SM5 289 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HS3ST5Q8IZT8 346 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LRRC75AQ8NAA5 344 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR9K2Q8NGE7 335 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MOSPD2Q8NHP6 518 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LRTOMTQ8WZ04 291 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF385AQ96PM9 386 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 REEP1Q9H902 201 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MCCC2Q9HCC0 563 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GLRX2Q9NS18 164 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 JKAMPQ9P055 326 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF629Q9UEG4 869 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RASD1Q9Y272 281 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 B3GALT5Q9Y2C3 310 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HIF3AQ9Y2N7 669 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SAMHD1Q9Y3Z3 626 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AP4S1Q9Y587 144 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CACNA1CQ13936 2221 aa11.02□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TRAV27A0A087WT01 109 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LOC102725191A0A1B0GVB3 256 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HTR3EA5X5Y0 456 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 YES1P07947 543 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AGAP20933 346 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 BMP5P22003 454 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GTF2E2P29084 291 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AQP2P41181 271 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GSSP48637 474 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SMSP52788 366 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RPL18Q07020 188 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PUDPQ08623 228 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZP4Q12836 540 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MICAQ29983 383 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 C1orf94Q6P1W5 598 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TFAP2EQ6VUC0 442 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CREB3L2Q70SY1 520 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AMIGO2Q86SJ2 522 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MCEMP1Q8IX19 187 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF808Q8N4W9 903 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CNEP1R1Q8N9A8 125 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR6K3Q8NGY3 331 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LILRB4Q8NHJ6 448 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SSC4DQ8WTU2 575 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 UCK2Q9BZX2 261 aa11.01□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ENKD1Q9H0I2 346 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms