RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 LAT2Q9GZY6 243 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SIAEQ9HAT2 523 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 PROK2Q9HC23 129 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 EXOSC3Q9NQT5 275 aaKnown RBP13.5□□□□□ -0.25
CAPN3-207ENST00000397200 KLF13Q9Y2Y9 288 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-207ENST00000397200 HEATR5AQ86XA9 2040 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 C17orf51A8MQB3 221 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 J3QRK9 145 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 OIP5O43482 229 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 HCN1O60741 890 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 CH25HO95992 272 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF12P17014 697 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 FUT1P19526 365 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 CRYBB2P43320 205 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 DNASE1L1P49184 302 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 GPR85P60893 370 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 TMED1Q13445 227 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 ALG10BQ5I7T1 473 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 OR5M10Q6IEU7 315 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 NIPAL3Q6P499 406 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 SMARCD3Q6STE5 483 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 CBLN3Q6UW01 205 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 PHC2Q8IXK0 858 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 CDK20Q8IZL9 346 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 TMEM178AQ8NBL3 297 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 OR13C2Q8NGS9 318 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 B4GALNT2Q8NHY0 566 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 MCFD2Q8NI22 146 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 TMEM41AQ96HV5 264 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 FRMD6Q96NE9 622 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 FAM173AQ9BQD7 235 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 ICAM5Q9UMF0 924 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 STUB1Q9UNE7 303 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 BAIAP2Q9UQB8 552 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 CSAG2Q9Y5P2 127 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 MGAQ8IWI9 3026 aa13.49□□□□□ -0.25
CAPN3-207ENST00000397200 ACACBO00763 2458 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 A0A0G2JMM0 328 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 A0A1W2PPB8 328 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 A0A1W2PRS3 328 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 KIR3DP1A8MWS1 328 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 KLRC4-KLRK1H3BQV0 150 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 GNB5O14775 395 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 SNPHO15079 494 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 GMFGO60234 142 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 TRIM3O75382 744 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-207ENST00000397200 SLC2A10O95528 541 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 IGF2P01344 180 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 PDGFAP04085 211 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 BMP7P18075 431 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 PTNP21246 168 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 MSX1P28360 303 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 CD97P48960 835 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 P2RX1P51575 399 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 ACSM1Q08AH1 577 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 TPBGQ13641 420 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 COL28A1Q2UY09 1125 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 LINC00303Q3SY05 128 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 CXXC5Q7LFL8 322 aaKnown RBP13.48□□□□□ -0.25
CAPN3-207ENST00000397200 GALNTL5Q7Z4T8 443 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 SULF2Q8IWU5 870 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 OR4K17Q8NGC6 315 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 NTNG2Q96CW9 530 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 SCMH1Q96GD3 660 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 JSRP1Q96MG2 331 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-207ENST00000397200 ENKD1Q9H0I2 346 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 CMC2Q9NRP2 79 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 DEPPQ9NTK1 212 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 TP53TG5Q9Y2B4 290 aa13.48□□□□□ -0.25
CAPN3-207ENST00000397200 A0A087WUJ7 227 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 IGLV3-32A0A0A0MS00 114 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 K7EM74 188 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 KPNA4O00629 521 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-207ENST00000397200 SULT1C4O75897 302 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 NUDT14O95848 222 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 FAM87AP0C7U9 286 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 SLC1A3P43003 542 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 SLC6A8P48029 635 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 CBFBQ13951 182 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 INPP5JQ15735 1006 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-207ENST00000397200 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 PLCZ1Q86YW0 608 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 WDSUB1Q8N9V3 476 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 BBS1Q8NFJ9 593 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 OR2M7Q8NG81 312 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 OR1J4Q8NGS1 313 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 OR52N1Q8NH53 320 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 OR5W2Q8NH69 310 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 CHPT1Q8WUD6 406 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-207ENST00000397200 ARSGQ96EG1 525 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 CNTNAP3BQ96NU0 1288 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 CNTNAP3Q9BZ76 1288 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 MED11Q9P086 117 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 TUBD1Q9UJT1 453 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms