RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TMEM43Q9BTV4 400 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 B3GALT5Q9Y2C3 310 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 CHP2O43745 196 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 BGLAPP02818 100 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 NQO1P15559 274 aaKnown RBP27.01■■□□□ 1.91
CMTM4-202ENST00000394106 ZNF83P51522 516 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 NKX6-1P78426 367 aaPredicted RBP27.01■■□□□ 1.91
CMTM4-202ENST00000394106 MFSD13AQ14CX5 517 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 ADAM5Q6NVV9 412 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 ABHD12BQ7Z5M8 362 aaPredicted RBP27.01■■□□□ 1.91
CMTM4-202ENST00000394106 KBTBD8Q8NFY9 601 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 OR2T12Q8NG77 320 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 LILRB1Q8NHL6 650 aaPredicted RBP27.01■■□□□ 1.91
CMTM4-202ENST00000394106 ADAMTS16Q8TE57 1224 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 NEUROG1Q92886 237 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 ASPNQ9BXN1 380 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 B3GAT1Q9P2W7 334 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 SH3GLB1Q9Y371 365 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 SLC25A15Q9Y619 301 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 ROS1P08922 2347 aa27.01■■□□□ 1.91
CMTM4-202ENST00000394106 CD99P14209 185 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 LTBQ06643 244 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 ZNF611Q8N823 705 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 C1orf162Q8NEQ5 155 aaPredicted RBP27■■□□□ 1.91
CMTM4-202ENST00000394106 OR6S1Q8NH40 331 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 MOGAT1Q96PD6 335 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 ALKBH3Q96Q83 286 aaPredicted RBP27■■□□□ 1.91
CMTM4-202ENST00000394106 C1QTNF6Q9BXI9 259 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 AMBRA1Q9C0C7 1298 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 BAG5Q9UL15 447 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 SLC7A7Q9UM01 511 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 CORINQ9Y5Q5 1042 aa27■■□□□ 1.91
CMTM4-202ENST00000394106 TRAPPC13A5PLN9 417 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 ZNF587BE7ETH6 402 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 LRRN3E7EW58 273 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 IFNA14P01570 189 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 THY1P04216 161 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 TNFRSF1BP20333 461 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 HOXC12P31275 282 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 LRRC23Q53EV4 343 aaPredicted RBP26.99■■□□□ 1.91
CMTM4-202ENST00000394106 LINC00114Q6XXX2 140 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 WDR88Q6ZMY6 472 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 TSPYL5Q86VY4 417 aaPredicted RBP26.99■■□□□ 1.91
CMTM4-202ENST00000394106 CARM1Q86X55 608 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 TREML1Q86YW5 311 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 WFDC11Q8NEX6 87 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 SLC17A5Q9NRA2 495 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 CMTM6Q9NX76 183 aa26.99■■□□□ 1.91
CMTM4-202ENST00000394106 UPK3AO75631 287 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 FOXD4Q12950 439 aaPredicted RBP26.98■■□□□ 1.91
CMTM4-202ENST00000394106 PMS2P3Q13401 168 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 KLHL17Q6TDP4 642 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 ARPINQ7Z6K5 226 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 MICU2Q8IYU8 434 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 C17orf78Q8N4C9 275 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 WDR31Q8NA23 367 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 ADPRHL1Q8NDY3 354 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 TMEM171Q8WVE6 324 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 FBXW5Q969U6 566 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 PERPQ96FX8 193 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 TMUB1Q9BVT8 246 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 NSRP1Q9H0G5 558 aaKnown RBP26.98■■□□□ 1.91
CMTM4-202ENST00000394106 RCE1Q9Y256 329 aa26.98■■□□□ 1.91
CMTM4-202ENST00000394106 ELOVL7A1L3X0 281 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 OR6C65A6NJZ3 312 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 M0R1B8 84 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 ABCD4O14678 606 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 LYPD3O95274 346 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 HPRP00739 348 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 ZNF672Q499Z4 452 aaPredicted RBP26.97■■□□□ 1.91
CMTM4-202ENST00000394106 CYBRD1Q53TN4 286 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 TTC33Q6PID6 262 aaPredicted RBP26.97■■□□□ 1.91
CMTM4-202ENST00000394106 TMEM108Q6UXF1 575 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 DEF8Q6ZN54 512 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 UEVLDQ8IX04 471 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 SCAIQ8N9R8 606 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 SLC41A3Q96GZ6 507 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 PCDHAC1Q9H158 963 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 GMPR2Q9P2T1 348 aaKnown RBP26.97■■□□□ 1.91
CMTM4-202ENST00000394106 AMDHD2Q9Y303 409 aa26.97■■□□□ 1.91
CMTM4-202ENST00000394106 MS4A18H0YCH9 400 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 KPNA4O00629 521 aaPredicted RBP26.96■■□□□ 1.91
CMTM4-202ENST00000394106 SHOX2O60902 331 aaPredicted RBP26.96■■□□□ 1.91
CMTM4-202ENST00000394106 LSP1P33241 339 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 GYS2P54840 703 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 SLC25A3Q00325 362 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 MS4A18Q3C1V0 323 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 HIKESHIQ53FT3 197 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 KLHL24Q6TFL4 600 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 LINGO2Q7L985 606 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 CPLX4Q7Z7G2 160 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 SLC15A3Q8IY34 581 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 LRRC75A-AS1Q8N1F1 130 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 EFCAB1Q9HAE3 211 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 MRPL39Q9NYK5 338 aaKnown RBP26.96■■□□□ 1.91
CMTM4-202ENST00000394106 LAMP3Q9UQV4 416 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 AP3M1Q9Y2T2 418 aa26.96■■□□□ 1.91
CMTM4-202ENST00000394106 MAP1AP78559 2803 aaPredicted RBP26.96■■□□□ 1.91
CMTM4-202ENST00000394106 ARHGEF9O43307 516 aa26.95■■□□□ 1.9
CMTM4-202ENST00000394106 TRAF3IP2O43734 574 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms