RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 HPRP00739 348 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 KLK3P07288 261 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 AADACP22760 399 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 FEN1P39748 380 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 CSNK1A1P48729 337 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 SGSHP51688 502 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 DCDC1P59894 354 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PRKCDQ05655 676 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR1C1Q15619 314 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 DUSP5Q16690 384 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 TRMT5Q32P41 509 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 TRIQKQ629K1 86 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 PLA2G4DQ86XP0 818 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 OR6K2Q8NGY2 324 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 COQ2Q96H96 371 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CNN2Q99439 309 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 ZNF442Q9H7R0 627 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 KRCC1Q9NPI7 259 aaPredicted RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 AK6Q9Y3D8 172 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 C3P01024 1663 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 CDK13Q14004 1512 aaKnown RBP3.17□□□□□ -1.9
XRN1-202ENST00000392981 ASXL1Q8IXJ9 1541 aa3.17□□□□□ -1.9
XRN1-202ENST00000392981 DIP2CQ9Y2E4 1556 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PRAG1Q86YV5 1406 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 A0A1B0GVT2 93 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SCO2A0A1W2PP80 73 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RPS10-NUDT3A0A1W2PQS6 291 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 GAGE12BA1L429 117 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 GAGE12HA6NDE8 117 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ADAM10O14672 748 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PIGRP01833 764 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 STXBP1P61764 594 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 RPS15AP62244 130 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 PTPRRQ15256 657 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RBMS2Q15434 407 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 INPP5JQ15735 1006 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 SLC25A52Q3SY17 297 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ZNF385BQ569K4 471 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ARMCX5Q6P1M9 558 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 STOX1Q6ZVD7 989 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 GPR141Q7Z602 305 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SPNS2Q8IVW8 549 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 OR7G2Q8NG99 324 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 OR52H1Q8NGJ2 320 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PLPPR1Q8TBJ4 325 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 FAM172AQ8WUF8 416 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 MRPS31Q92665 395 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 SLC22A12Q96S37 553 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 UBE2ZQ9H832 354 aaPredicted RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 APOBEC3GQ9HC16 384 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 DMRT1Q9Y5R6 373 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PEX16Q9Y5Y5 336 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 HS3ST3A1Q9Y663 406 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PLB1Q6P1J6 1458 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SPATA31A6Q5VVP1 1343 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ZFYVE16Q7Z3T8 1539 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SHANK3Q9BYB0 1731 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CFAP47Q6ZTR5 3102 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 IQGAP3Q86VI3 1631 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 USP32Q8NFA0 1604 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PRSS37A4D1T9 235 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 C1QTNF3-AMACRE9PGA6 284 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 OR7A17O14581 309 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 CBR3O75828 277 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 GAPDHP04406 335 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 SERPINA2P20848 420 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 HSPA9P38646 679 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 CRISP1P54107 249 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RPL10AP62906 217 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 DYNLL1P63167 89 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 MAT1AQ00266 395 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 SERTAD2Q14140 314 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ITIH4Q14624 930 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SLC9A3R2Q15599 337 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 EFNB3Q15768 340 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 TNXAQ16473 311 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 HIST2H3PS2Q5TEC6 136 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 KCTD16Q68DU8 428 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 BAIAP2L2Q6UXY1 529 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 G2E3Q7L622 706 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 TEX26Q8N6G2 289 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 GPR151Q8TDV0 419 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PNPLA2Q96AD5 504 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SERPINI1Q99574 410 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 NEURL2Q9BR09 285 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 ULBP1Q9BZM6 244 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 UPF3AQ9H1J1 476 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 LIME1Q9H400 295 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 REEP4Q9H6H4 257 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 PELI2Q9HAT8 420 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 MRPS30Q9NP92 439 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 ARMC1Q9NVT9 282 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 SMOXQ9NWM0 555 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 EFCAB5A4FU69 1503 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 NEURL4Q96JN8 1562 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 A0A1W2PQ67 120 aa3.16□□□□□ -1.9
XRN1-202ENST00000392981 RNASEH1O60930 286 aaKnown RBP3.16□□□□□ -1.9
XRN1-202ENST00000392981 ARHGEF15O94989 841 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms