RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 BGLAPP02818 100 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 THRBP10828 461 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 PAX7P23759 505 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 HOXC12P31275 282 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 IFNA8P32881 189 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 NTF4P34130 210 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 PRSS12P56730 875 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 LIPEQ05469 1076 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 C1DQ13901 141 aaKnown RBP11.17□□□□□ -0.62
GGPS1-203ENST00000391855 TSC22D1Q15714 1073 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 STK11Q15831 433 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 ACKR1Q16570 336 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 CYBRD1Q53TN4 286 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 TTC33Q6PID6 262 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-203ENST00000391855 ZNF704Q6ZNC4 412 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-203ENST00000391855 EPHX4Q8IUS5 362 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 LURAP1LQ8IV03 231 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 OR4D11Q8NGI4 311 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 PIGTQ969N2 578 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 MUS81Q96NY9 551 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 PIP5K1AQ99755 562 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 TMEM204Q9BSN7 226 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 ZNF426Q9BUY5 554 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 LIME1Q9H400 295 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 ALG2Q9H553 416 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 SLC7A10Q9NS82 523 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 CCM2LQ9NUG4 571 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-203ENST00000391855 BEX4Q9NWD9 120 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-203ENST00000391855 MRPL39Q9NYK5 338 aaKnown RBP11.17□□□□□ -0.62
GGPS1-203ENST00000391855 ABCD2Q9UBJ2 740 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 AMDHD2Q9Y303 409 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
GGPS1-203ENST00000391855 MYO9AB2RTY4 2548 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 NME4O00746 187 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 KRT33AO76009 404 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 IGF2P01344 180 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 CD3EP07766 207 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 ITGA5P08648 1049 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 NQO1P15559 274 aaKnown RBP11.16□□□□□ -0.62
GGPS1-203ENST00000391855 RBM34P42696 430 aaKnown RBP11.16□□□□□ -0.62
GGPS1-203ENST00000391855 GSK3BP49841 420 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 SH3BGRP55822 239 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-203ENST00000391855 TAS2R41P59536 307 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 SELENOWP63302 87 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 GABRA6Q16445 453 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 NCMAPQ5T1S8 102 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 ADAM5Q6NVV9 412 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 PIGWQ7Z7B1 504 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 RBM45Q8IUH3 476 aaKnown RBP11.16□□□□□ -0.62
GGPS1-203ENST00000391855 UEVLDQ8IX04 471 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 C10orf53Q8N6V4 93 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 ANKK1Q8NFD2 765 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 BOD1Q96IK1 185 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 FKRPQ9H9S5 495 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 SPAG4Q9NPE6 437 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 OBP2BQ9NPH6 170 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 B3GAT1Q9P2W7 334 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 SLC7A7Q9UM01 511 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 USP22Q9UPT9 525 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 ABCA4P78363 2273 aa11.16□□□□□ -0.62
GGPS1-203ENST00000391855 LRBAP50851 2863 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 HTR3EA5X5Y0 456 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 CXCR6O00574 342 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 GSTA4O15217 222 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 SLC43A1O75387 559 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 LYPD3O95274 346 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 CD53P19397 219 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 SELENOPP49908 381 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 CLDN17P56750 224 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 PSME3P61289 254 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 IL1RL1Q01638 556 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 PUDPQ08623 228 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 PMS2P3Q13401 168 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 NIPAL3Q6P499 406 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 KLHL17Q6TDP4 642 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 KLHL24Q6TFL4 600 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 SEZ6L2Q6UXD5 910 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 DEF8Q6ZN54 512 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 P3H2Q8IVL5 708 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 PIK3C3Q8NEB9 887 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 OR5J2Q8NH18 312 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 RADILQ96JH8 1075 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 HS6ST2Q96MM7 605 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 UBTD1Q9HAC8 227 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 MOV10Q9HCE1 1003 aaKnown RBP11.15□□□□□ -0.62
GGPS1-203ENST00000391855 NDE1Q9NXR1 346 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 ZNF229Q9UJW7 825 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 NOX1Q9Y5S8 564 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 SLC25A15Q9Y619 301 aa11.15□□□□□ -0.62
GGPS1-203ENST00000391855 POLQO75417 2590 aa11.14□□□□□ -0.63
GGPS1-203ENST00000391855 TRAF3IP2O43734 574 aaPredicted RBP11.14□□□□□ -0.63
GGPS1-203ENST00000391855 ZNF432O94892 652 aa11.14□□□□□ -0.63
GGPS1-203ENST00000391855 OR6A2O95222 327 aa11.14□□□□□ -0.63
GGPS1-203ENST00000391855 WNT11O96014 354 aa11.14□□□□□ -0.63
GGPS1-203ENST00000391855 THY1P04216 161 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms