RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 A0A1W2PRQ8 180 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ITGA10O75578 1167 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 HLA-DPB1P04440 258 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ITGAMP11215 1152 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 HLA-DOBP13765 273 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 TMBIM6P55061 237 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 BIDP55957 195 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 CLRN1P58418 232 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 RPS15P62841 145 aaKnown RBP7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ILKQ13418 452 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 NKPD1Q17RQ9 610 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 MRM1Q6IN84 353 aaKnown RBP7.4□□□□□ -1.23
CKAP2-203ENST00000378037 LCN10Q6JVE6 187 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF322Q6U7Q0 402 aaPredicted RBP7.4□□□□□ -1.23
CKAP2-203ENST00000378037 PAMR1Q6UXH9 720 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 Q8N402 240 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF283Q8N7M2 679 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 C17orf47Q8NEP4 570 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 SFXN2Q96NB2 322 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 GUCD1Q96NT3 240 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 TEAD3Q99594 435 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ORAI3Q9BRQ5 295 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 ALG12Q9BV10 488 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 RTN4RQ9BZR6 473 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 SLITRK2Q9H156 845 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 CHRDQ9H2X0 955 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 FKRPQ9H9S5 495 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 SMURF1Q9HCE7 757 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 CRNNQ9UBG3 495 aaPredicted RBP7.4□□□□□ -1.23
CKAP2-203ENST00000378037 CES1P1Q9UKY3 287 aa7.4□□□□□ -1.23
CKAP2-203ENST00000378037 FAM172BPA6NC97 362 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ZAR1LA6NP61 321 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 SMLR1H3BR10 107 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 EPPINO95925 133 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CT45A8P0DMV1 189 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CT45A9P0DMV2 189 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PSMA3P25788 255 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 GDF1P27539 372 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TRA2BP62995 288 aaKnown RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 RPL18Q07020 188 aaKnown RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF829Q3KNS6 432 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CT45A2Q5DJT8 189 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 HEPHL1Q6MZM0 1159 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 FAHD1Q6P587 224 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CNIH2Q6PI25 160 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 MCEMP1Q8IX19 187 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 OR2L13Q8N349 312 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TM9SF4Q92544 642 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 RNF170Q96K19 258 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 DCLRE1CQ96SD1 692 aaKnown RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CNN2Q99439 309 aaKnown RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 C12orf49Q9H741 205 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TIMMDC1Q9NPL8 285 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 MYO9AB2RTY4 2548 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 LRRK2Q5S007 2527 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TMED7-TICAM2A0A0A6YYA0 188 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 NPIPB8E9PQR5 432 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TEX46H3BTG2 121 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 HSPB6O14558 160 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 BRINP1O60477 761 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF43P17038 809 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 GPR143P51810 404 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 FABP5Q01469 135 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CFHR1Q03591 330 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF117Q03924 483 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PLK5Q496M5 336 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 KLHL24Q6TFL4 600 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 NDUFAF7Q7L592 441 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 GLB1L2Q8IW92 636 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PHC2Q8IXK0 858 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 WDR34Q96EX3 536 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 COX4I2Q96KJ9 171 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 MROQ9BYG7 248 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PTGES2Q9H7Z7 377 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PRDM9Q9NQV7 894 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ENAMQ9NRM1 1142 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 MAN2C1Q9NTJ4 1040 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PARPBPQ9NWS1 579 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TXNL4BQ9NX01 149 aaKnown RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 STMN3Q9NZ72 180 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 CGGBP1Q9UFW8 167 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 KCNG2Q9UJ96 466 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TMED7Q9Y3B3 224 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 PCDHGA3Q9Y5H0 932 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 A0A096LPE4 126 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 A0A1W2PPZ6 126 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 A0A1W2PQ09 198 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ARGFXA6NJG6 315 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF593O00488 134 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 GABRPO00591 440 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 ADRA2AP08913 450 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 TBXA2RP21731 343 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 EPHA8P29322 1005 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-203ENST00000378037 MNDAP41218 407 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 FOLR3P41439 243 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 POU3F4P49335 361 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 E2F2Q14209 437 aa7.39□□□□□ -1.23
CKAP2-203ENST00000378037 COL19A1Q14993 1142 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms