RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KRT33AO76009 404 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 CELA2BP08218 269 aaPredicted RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 RNH1P13489 461 aaKnown RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 NUDT1P36639 197 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 GRK6P43250 576 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 AP3S2P59780 193 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 ZP1P60852 638 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 BTG2P78543 158 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 IL10RAQ13651 578 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 LINC01590Q5TEZ4 76 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 TAF8Q7Z7C8 310 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 CDH24Q86UP0 819 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 MCATQ8IVS2 390 aaKnown RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 C10orf53Q8N6V4 93 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 FRMD1Q8N878 549 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 Q96M85 177 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 DGAT2Q96PD7 388 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 CDCA3Q99618 268 aaPredicted RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 CLEC4MQ9H2X3 399 aaPredicted RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 KIR2DS5A0A0G2JLQ3 304 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 A0A0G2JNG1 304 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 KIR2DS3K7RE56 304 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 KHDRBS3O75525 346 aaKnown RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 TACSTD2P09758 323 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 CTHP32929 405 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 AQP2P41181 271 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 KIR2DS5Q14953 304 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 OR2T35Q8NGX2 323 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 C16orf52Q8NHV5 167 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 C1orf216Q8TAB5 229 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 RPS4Y2Q8TD47 263 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 RGP1Q92546 391 aaPredicted RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 PIGKQ92643 395 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 ADAD1Q96M93 576 aaKnown RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 TSSK2Q96PF2 358 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 SEMA6CQ9H3T2 930 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 METTL17Q9H7H0 456 aaPredicted RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 PRTFDC1Q9NRG1 225 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 EMC3Q9P0I2 261 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 PRELID1Q9Y255 219 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 YBX2Q9Y2T7 364 aaKnown RBP13.29□□□□□ -0.28
MSH5-201ENST00000375703 HS3ST3A1Q9Y663 406 aa13.29□□□□□ -0.28
MSH5-201ENST00000375703 NAP1L6A6NFF2 107 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ELOA3DA6NLF2 546 aaPredicted RBP13.28□□□□□ -0.28
MSH5-201ENST00000375703 OR5K4A6NMS3 321 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 C4orf47A7E2U8 309 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 PRR32B1ATL7 298 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 FOXS1O43638 330 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 SULT1B1O43704 296 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ICMTO60725 284 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 SELENOPP49908 381 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 RPS4XP62701 263 aaKnown RBP13.28□□□□□ -0.28
MSH5-201ENST00000375703 MAT1AQ00266 395 aaKnown RBP13.28□□□□□ -0.28
MSH5-201ENST00000375703 SNTA1Q13424 505 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ELOA3BQ3SY89 546 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ZNF684Q5T5D7 378 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 SLC6A19Q695T7 634 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 APOOLQ6UXV4 268 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 NLRC3Q7RTR2 1065 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ARHGEF39Q8N4T4 335 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ELOA3Q8NG57 546 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 TSPAN10Q9H1Z9 355 aaPredicted RBP13.28□□□□□ -0.28
MSH5-201ENST00000375703 OR10A5Q9H207 317 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 TCF7L1Q9HCS4 588 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 NANSQ9NR45 359 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 ZNF346Q9UL40 294 aaKnown RBP13.28□□□□□ -0.28
MSH5-201ENST00000375703 ERVK-19Q9WJR5 959 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 FANCMQ8IYD8 2048 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 A0A1B0GTQ1 180 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 MEN1O00255 615 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 CLDN4O14493 209 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 PRAF2O60831 178 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 TOXO94900 526 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 TGM6O95932 706 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 GPR3P46089 330 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 VEGFCP49767 419 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 SIGIRRQ6IA17 410 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 Q6ZTK2 550 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 KCTD20Q7Z5Y7 419 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 GATSQ8NAP1 163 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 PBX4Q9BYU1 374 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 SLC19A3Q9BZV2 496 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 OR5V1Q9UGF6 321 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 FOXJ3Q9UPW0 622 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 NPTNQ9Y639 398 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 TRANK1O15050 2925 aa13.28□□□□□ -0.28
MSH5-201ENST00000375703 A0A087WV48 116 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 TMEM72A0PK05 275 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 IFNA7P01567 189 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 OR8G3PP0DMU2 310 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 LCN1P31025 176 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 PBX2P40425 430 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 PTH2RP49190 550 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 HHEXQ03014 270 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 POU4F3Q15319 338 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms