RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ZNF879B4DU55 563 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 C1orf105O95561 183 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 SOD2P04179 222 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 BSGP35613 385 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 FOXK2Q01167 660 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 GFOD2Q3B7J2 385 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 AKIRIN2Q53H80 203 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 ACOT7LQ6ZUV0 252 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 OR52L1Q8NGH7 329 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 SEC22AQ96IW7 307 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 BBS4Q96RK4 519 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 LSM7Q9UK45 103 aaKnown RBP18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 MAFFQ9ULX9 164 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 V9GY05 133 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 A0A0C4DFX4 3053 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 ANKRD61A6NGH8 418 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 H7C417 338 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 INHAP05111 366 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 GKN3PP0CG01 181 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 CD79AP11912 226 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 PSMB10P40306 273 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 YOD1Q5VVQ6 348 aaPredicted RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 UNQ9370/PRO34162Q6UXP9 181 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 DEFB128Q7Z7B8 93 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 GTF3AQ92664 365 aaKnown RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 ZC3H10Q96K80 434 aaKnown RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 CLCC1Q96S66 551 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 RSRP1Q9BUV0 290 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 AHSPQ9NZD4 102 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 B4GALT6Q9UBX8 382 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 MTFP1Q9UDX5 166 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 KCNAB3O43448 404 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 TBX19O60806 448 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 CTNSO60931 367 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 GLSO94925 669 aaPredicted RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 HMGN2P05204 90 aaKnown RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 CKMP06732 381 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 EDNRAP25101 427 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 RGS8P57771 180 aaPredicted RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 NUMA1Q14980 2115 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 THSD4Q6ZMP0 1018 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 DNM1P46Q6ZS02 220 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 LNX2Q8N448 690 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 DVL3Q92997 716 aaPredicted RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 HIST1H2BAQ96A08 127 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 MIB2Q96AX9 1013 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 SGPP1Q9BX95 441 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 IL21Q9HBE4 155 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 CMC2Q9NRP2 79 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 INSL5Q9Y5Q6 135 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 SLC5A10A0PJK1 596 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 TMPRSS11DO60235 418 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 OR4E1P0C645 316 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 OR8U8P0C7N1 319 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 NQO2P16083 231 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 BMP7P18075 431 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 MAKP20794 623 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 CASRP41180 1078 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 SNRPD1P62314 119 aaKnown RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 DEFA6Q01524 100 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 GUCA2AQ02747 115 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 PPP1R16AQ96I34 528 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 TOX2Q96NM4 488 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 DZANK1Q9NVP4 752 aa18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 WSB2Q9NYS7 404 aaPredicted RBP18.87■□□□□ 0.61
TMEFF1-201ENST00000374879 FAM86C2PA6NEL3 165 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 NARSO43776 548 aaKnown RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SLC25A4P12235 298 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 AKR1C3P42330 323 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 CXADRP78310 365 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 OR7A5Q15622 319 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 MRM1Q6IN84 353 aaKnown RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 DMRTC2Q8IXT2 367 aaPredicted RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 ZNF561Q8N587 486 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 OR8S1Q8NH09 359 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 AMDHD1Q96NU7 426 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 RSPH9Q9H1X1 276 aaPredicted RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SUV39H2Q9H5I1 410 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SMCO4Q9NRQ5 59 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SIDT1Q9NXL6 827 aaKnown RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 RCC2Q9P258 522 aaKnown RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 NUP210Q8TEM1 1887 aaPredicted RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 CCSO14618 274 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 GTF2F2P13984 249 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 AGAP20933 346 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SLC2A5P22732 501 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 EIF2S3P41091 472 aaKnown RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 ANXA11P50995 505 aaKnown RBP18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 CRMP1Q14194 572 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 C15orf54Q8N8G6 183 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 AMER3Q8N944 861 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 RASGEF1AQ8N9B8 481 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SDR9C7Q8NEX9 313 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 NRIP2Q9BQI9 281 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 COMMD9Q9P000 198 aa18.86■□□□□ 0.61
TMEFF1-201ENST00000374879 SULT2B1O00204 365 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 MAN2B1O00754 1011 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 PQBP1O60828 265 aaKnown RBP18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 ATP1B3P54709 279 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms