RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 IL7RP16871 459 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ATP6V1C1P21283 382 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 TBXA2RP21731 343 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 HTR2AP28223 471 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ACAA2P42765 397 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 PNLIPRP2P54317 469 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 FBXW4P57775 412 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 LOXL3P58215 753 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 MLF1P58340 268 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PLCXD2Q0VAA5 305 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 RIN1Q13671 783 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 FGFBP1Q14512 234 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 LARS2Q15031 903 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 TRIP10Q15642 601 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 CD226Q15762 336 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ZNF791Q3KP31 576 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 OGFRL1Q5TC84 451 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 FAM90A2PQ658T7 463 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 B3GNTL1Q67FW5 361 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 OR2T5Q6IEZ7 315 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 H3F3CQ6NXT2 135 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 MARCH3Q86UD3 253 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 RAB43Q86YS6 212 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 EPHX4Q8IUS5 362 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PEX5LQ8IYB4 626 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 HS3ST5Q8IZT8 346 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 OR5L2Q8NGL0 311 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 OR4C15Q8NGM1 316 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 OR2T29Q8NH02 315 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PHF10Q8WUB8 498 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 RNF138Q8WVD3 245 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 GEMIN6Q8WXD5 167 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 PROX1Q92786 737 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 CENPNQ96H22 339 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 CMTM3Q96MX0 182 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ZNF300Q96RE9 604 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 NODALQ96S42 347 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 RASL10BQ96S79 203 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 EFHD1Q9BUP0 239 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 CDCP1Q9H5V8 836 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 UBQLN4Q9NRR5 601 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ACER3Q9NUN7 267 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 C6orf203Q9P0P8 240 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 RHCGQ9UBD6 479 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 IFT52Q9Y366 437 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 APC2O95996 2303 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 EXPH5Q8NEV8 1989 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 CELSR3Q9NYQ7 3312 aa3.21□□□□□ -1.89
MCF2-202ENST00000370573 HEATR5AQ86XA9 2040 aa3.21□□□□□ -1.89
MCF2-202ENST00000370573 OR6C70A6NIJ9 312 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 B4DXG7 233 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 B5MCH6 92 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 DPM1O60762 260 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 OR6B1O95007 311 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 IFNW1P05000 195 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 FCGR1AP12314 374 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ZNF26P17031 533 aaPredicted RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 NAGAP17050 411 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 PRKACGP22612 351 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 LCN1P31025 176 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 RPS19P39019 145 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 PTGDSP41222 190 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 SOX3P41225 446 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 GAS1P54826 345 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 PSMD4P55036 377 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 LRRC36Q1X8D7 754 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 LIN52Q52LA3 116 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 DCAF10Q5QP82 559 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 MRPL2Q5T653 305 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 DEF8Q6ZN54 512 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 NUP54Q7Z3B4 507 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 RPS19BP1Q86WX3 136 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 SIRT6Q8N6T7 355 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ZNF614Q8N883 585 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 GATSQ8NAP1 163 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 POGLUT1Q8NBL1 392 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ICA1LQ8NDH6 482 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 FAM71CQ8NEG0 241 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 GRHL3Q8TE85 626 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 RASSF5Q8WWW0 418 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 TFAP2CQ92754 450 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 KIAA1143Q96AT1 154 aaPredicted RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 NTNG2Q96CW9 530 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 NXPE2Q96DL1 559 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 THOC3Q96J01 351 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 VPS50Q96JG6 964 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CIB1Q99828 191 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 HOXD1Q9GZZ0 328 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 COQ10BQ9H8M1 238 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CTPS2Q9NRF8 586 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 MAN2C1Q9NTJ4 1040 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 A4GNTQ9UNA3 340 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 YARS2Q9Y2Z4 477 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 TESMINQ9Y4I5 508 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CNTRLQ7Z7A1 2325 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 NCOR2Q9Y618 2525 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 EML6Q6ZMW3 1958 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ZFHX4Q86UP3 3567 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 TRBV4-1A0A0J9YWV2 114 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms