RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 RAB3CQ96E17 227 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 ISYNA1Q9NPH2 558 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 SLC22A11Q9NSA0 550 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 A6NLC8 198 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 MMP2P08253 660 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 TAGLN2P37802 199 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 DGCR2P98153 550 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 C1orf61Q13536 156 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 UBXN2BQ14CS0 331 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 BTF3L4Q96K17 158 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 ENTPD2Q9Y5L3 495 aa16.75■□□□□ 0.27
CHRNA4-201ENST00000370263 FXYD1O00168 92 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 F13BP05160 661 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 F3P13726 295 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 ALKBH1Q13686 389 aaKnown RBP16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 RAB33AQ14088 237 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 CNN3Q15417 329 aaKnown RBP16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 TMPPEQ6ZT21 453 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 GDF7Q7Z4P5 450 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 FOXN4Q96NZ1 517 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 OR11A1Q9GZK7 315 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 SLC25A37Q9NYZ2 338 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 CROCCQ5TZA2 2017 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 HOXC13P31276 330 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 ZNF705AQ6ZN79 300 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 Q6ZTK2 550 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 OR52E1Q8NGJ3 308 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 TMEM255BQ8WV15 326 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 CHTF18Q8WVB6 975 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 FAM3DQ96BQ1 224 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 A0A1W2PPV4 95 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 C17orf105B2RV13 164 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 PSMB5P28074 263 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 KIR2DS3Q14952 304 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 DEFB110Q30KQ9 67 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 OR52I2Q8NH67 350 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 ZNF768Q9H5H4 540 aaKnown RBP16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 SERTAD4Q9NUC0 356 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 LOC100289279A0A1B0GTE1 492 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 KLF8O95600 359 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 C1SP09871 688 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 TEX261Q6UWH6 196 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 KLHDC8BQ8IXV7 354 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 KCNRGQ8N5I3 272 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 OR10A5Q9H207 317 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 OR10A2Q9H208 303 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 U3KQ87 197 aa16.74■□□□□ 0.27
CHRNA4-201ENST00000370263 TIMP2P16035 220 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 AKR1C1Q04828 323 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 FAM69BQ5VUD6 431 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 PAQR6Q6TCH4 344 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 RBMS3Q6XE24 437 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 BTLAQ7Z6A9 289 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 LDAHQ9H6V9 325 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 GCM1Q9NP62 436 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 ZNF593O00488 134 aaPredicted RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 NUDT21O43809 227 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 EFNA3P52797 238 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 RPS18P62269 152 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 CCDC190Q86UF4 302 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 SDSLQ96GA7 329 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 C1QTNF3Q9BXJ4 246 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 TMEM59Q9BXS4 323 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 CBLCQ9ULV8 474 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 NUMBLQ9Y6R0 609 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 KDM4EB2RXH2 506 aaPredicted RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 FTCDNL1E5RQL4 147 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 H3BML4 177 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 RPP30P78346 268 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 MRPS34P82930 218 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 PRDX1Q06830 199 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 OR7A5Q15622 319 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 ZNF74Q16587 644 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 TMEM179BQ7Z7N9 219 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 OR1M1Q8NGA1 313 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 DIO2Q92813 273 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 NMNAT3Q96T66 252 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 WDR76Q9H967 626 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 PEX12O00623 359 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 B4GALT3O60512 393 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 GPR75O95800 540 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 ZNF28P17035 718 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 RAB4AP20338 218 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 ITGB7P26010 798 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 IAH1Q2TAA2 248 aaPredicted RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 SLIRPQ9GZT3 109 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 CHST8Q9H2A9 424 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 IFT22Q9H7X7 185 aa16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 EXOSC3Q9NQT5 275 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-201ENST00000370263 SGK494L7N484 410 aa16.72■□□□□ 0.27
CHRNA4-201ENST00000370263 HNRNPA1P09651 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHRNA4-201ENST00000370263 ZNF44P15621 663 aa16.72■□□□□ 0.27
CHRNA4-201ENST00000370263 NAGAP17050 411 aa16.72■□□□□ 0.27
CHRNA4-201ENST00000370263 CPXM2Q8N436 756 aa16.72■□□□□ 0.27
CHRNA4-201ENST00000370263 OR6M1Q8NGM8 313 aa16.72■□□□□ 0.27
CHRNA4-201ENST00000370263 CMSS1Q9BQ75 279 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms