RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NDUFA6P56556 154 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NRN1LQ496H8 165 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PARP16Q8N5Y8 322 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 LINC00116Q8NCU8 138 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MIB2Q96AX9 1013 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC37A4O43826 429 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DSC2Q02487 901 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DUSP4Q13115 394 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GAB1Q13480 694 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TEAD2Q15562 447 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ANKRD34AQ69YU3 496 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DPY19L4Q7Z388 723 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR5L1Q8NGL2 311 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TMBIM1Q969X1 311 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 YDJCA8MPS7 323 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CLN3Q13286 438 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PGBD5Q8N414 524 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DEFB119Q8N690 84 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DMRTA2Q96SC8 542 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TSPAN16Q9UKR8 245 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 KDELR2P33947 212 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CCR2P41597 374 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 NHLH1Q02575 133 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SIM2Q14190 667 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR10K2Q6IF99 312 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RD3Q7Z3Z2 195 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SLC5A7Q9GZV3 580 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 APEX1P27695 318 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 HERV-K104P61576 105 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PXYLP1Q8TE99 480 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 KCNK15Q9H427 330 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GNG8Q9UK08 70 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 DUS4LO95620 317 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 VAMP2P63027 116 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF648Q5T619 568 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CYHR1Q6ZMK1 362 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SLC25A19Q9HC21 320 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZCCHC3Q9NUD5 404 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ARSAP15289 507 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ERVFC1P60507 584 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TGFBR3Q03167 851 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CELF3Q5SZQ8 465 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 KIRREL1Q96J84 757 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 HIST1H2AAQ96QV6 131 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 AJAP1Q9UKB5 411 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PLSCR5A0PG75 271 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RECQL4O94761 1208 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MSX1P28360 303 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 WNT3AP56704 352 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 HMGCLL1Q8TB92 370 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZFP14Q9HCL3 533 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM189-UBE2V1I3L0A0 370 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR1E1P30953 314 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 EMP3P54852 163 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TMPRSS3P57727 454 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TUSC3Q13454 348 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RGL4Q8IZJ4 473 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LRRC18Q8N456 261 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 UBE2FQ969M7 185 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FAM90A26D6RGX4 464 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FZD7O75084 574 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ALDH2P05091 517 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR5AL1P0C617 328 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 UGCGQ16739 394 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RAB6CQ53S08 254 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 C6orf136Q5SQH8 315 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RAB6CQ9H0N0 254 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 KCNK12Q9HB15 430 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 A0A087X0M5 115 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LOC100289279A0A1B0GTE1 492 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LOC102725191A0A1B0GVB3 256 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 A0A1B0GX30 115 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MPDU1O75352 247 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 THBS2P35442 1172 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LGI3Q8N145 548 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 NETO1Q8TDF5 533 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ADAMTS15Q8TE58 950 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PSMF1Q92530 271 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 EXOSC8Q96B26 276 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RBM38Q9H0Z9 239 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ALG9Q9H6U8 611 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GIMAP2Q9UG22 337 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 H3BQ85 93 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CDS2O95674 445 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GCH1P30793 250 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MOGAT2Q3SYC2 334 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GRASPQ7Z6J2 395 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR52H1Q8NGJ2 320 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MRGPRDQ8TDS7 321 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RLIMQ9NVW2 624 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ADH1AP07327 375 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SELEP16581 610 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CD34P28906 385 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SPIBQ01892 262 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FRMPD2BQ6IN97 320 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ABHD17CQ6PCB6 329 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TREX1Q9NSU2 369 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 AKT2P31751 481 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TBX4P57082 545 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ELOBQ15370 118 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms