RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 GZMKP49863 264 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 GATMP50440 423 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 ATP1B3P54709 279 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 ISL1P61371 349 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 CLDN10P78369 228 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 SRPXP78539 464 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 GTF2H5Q6ZYL4 71 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 SSX7Q7RTT5 188 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 CLEC14AQ86T13 490 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 PRR22Q8IZ63 422 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 METTL9Q9H1A3 318 aa12.48□□□□□ -0.41
CCDC144A-203ENST00000360495 A0A1W2PQU0 124 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 NME2P1O60361 137 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 RNGTTO60942 597 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 ANGPTL6Q8NI99 470 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SELENOIQ9C0D9 397 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SPEF2Q9C093 1822 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 NPIPB15A6NHN6 443 aaPredicted RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 ZNF728P0DKX0 622 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC35A2P78381 396 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 C1orf61Q13536 156 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 PDE7AQ13946 482 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 TAF9Q16594 264 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 DEFB119Q8N690 84 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 RELL2Q8NC24 303 aaPredicted RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 OR52N1Q8NH53 320 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 PPP1R35Q8TAP8 253 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 TMED6Q8WW62 240 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 HAPLN2Q9GZV7 340 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 TUBB1Q9H4B7 451 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 ZNF724A8MTY0 619 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 DPP4P27487 766 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 VIPR2P41587 438 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC7A9P82251 487 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 CDH20Q9HBT6 801 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 VDAC3Q9Y277 283 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 MED16Q9Y2X0 877 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 GFRA2O00451 464 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 F2P00734 622 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SOD2P04179 222 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 HLA-FP30511 346 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 DEFB110Q30KQ9 67 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 SOWAHCQ53LP3 525 aaPredicted RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 MKXQ8IYA7 352 aa12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-203ENST00000360495 H7BYZ3 331 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 XRCC3O43542 346 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 F13BP05160 661 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 GABRB1P18505 474 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 TACR1P25103 407 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 OR1S2Q8NGQ3 325 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 DYNC2LI1Q8TCX1 351 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 NANOS1Q8WY41 292 aaKnown RBP12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 ALG12Q9BV10 488 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SEMA4CQ9C0C4 833 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 OR6C68A6NDL8 312 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 CLDN1O95832 211 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 MAKP20794 623 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 COTL1Q14019 142 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SECTM1Q8WVN6 248 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 TANKQ92844 425 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC23A2Q9UGH3 650 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 ANKRD12Q6UB98 2062 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 NAGAP17050 411 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SPRYD7Q5W111 196 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 ZNF574Q6ZN55 896 aaPredicted RBP12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC35D2Q76EJ3 337 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 NANOGP1Q8N7R0 232 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 OR52R1Q8NGF1 315 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 AKR7LQ8NHP1 331 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC38A5Q8WUX1 472 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 ZMAT3Q9HA38 289 aaKnown RBP12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 MRPS28Q9Y2Q9 187 aaKnown RBP12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 CSAG2Q9Y5P2 127 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 NPFFR2Q9Y5X5 522 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 PRSS21Q9Y6M0 314 aa12.46□□□□□ -0.41
CCDC144A-203ENST00000360495 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 GJE1A6NN92 205 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 PHOX2AO14813 284 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 PHF1O43189 567 aaPredicted RBP12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 MMP2P08253 660 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 TRA2BP62995 288 aaKnown RBP12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 SERTAD2Q14140 314 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 SLC10A1Q14973 349 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 CTU2Q2VPK5 515 aaKnown RBP12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 OPN5Q6U736 354 aa12.46□□□□□ -0.42
CCDC144A-203ENST00000360495 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms