RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MT-CO3P00414 261 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 OTX2P32243 289 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 APOBEC1P41238 236 aaKnown RBP23.23■■□□□ 1.31
CLK2-201ENST00000355560 ZNF41P51814 821 aaPredicted RBP23.23■■□□□ 1.31
CLK2-201ENST00000355560 ZNF85Q03923 595 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 KRR1Q13601 381 aaKnown RBP23.23■■□□□ 1.31
CLK2-201ENST00000355560 DHRS13Q6UX07 377 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 ATP6V1C2Q8NEY4 427 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 MMP27Q9H306 513 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 AKIP1Q9NQ31 210 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 SDK2Q58EX2 2172 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 IGLV3-32A0A0A0MS00 114 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 CLDN25C9JDP6 229 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 MASP2O00187 686 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 TP53I11O14683 189 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 TFP02787 698 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 NAA10P41227 235 aaPredicted RBP23.23■■□□□ 1.31
CLK2-201ENST00000355560 INPP5JQ15735 1006 aaPredicted RBP23.23■■□□□ 1.31
CLK2-201ENST00000355560 MESTQ5EB52 335 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 EMC4Q5J8M3 183 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 SLC35D3Q5M8T2 416 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 SLC6A19Q695T7 634 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 IL20RBQ6UXL0 311 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 PPP1R32Q7Z5V6 425 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 C6orf62Q9GZU0 229 aaPredicted RBP23.23■■□□□ 1.31
CLK2-201ENST00000355560 HMG20AQ9NP66 347 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 WDR70Q9NW82 654 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 FOXJ2Q9P0K8 574 aa23.23■■□□□ 1.31
CLK2-201ENST00000355560 OR2T1O43869 369 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 GRPRP30550 384 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 IDUAP35475 653 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 SOX6P35712 828 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 DIO1P49895 249 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 DLX5P56178 289 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 BDH1Q02338 343 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 PRAMEF20Q5VT98 475 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 C22orf42Q6IC83 251 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 OPN5Q6U736 354 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 BABAM2Q9NXR7 383 aa23.22■■□□□ 1.31
CLK2-201ENST00000355560 CCDC187A0A096LP49 1063 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 AHCYP23526 432 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 IL10RAQ13651 578 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 CRTC2Q53ET0 693 aaPredicted RBP23.21■■□□□ 1.31
CLK2-201ENST00000355560 GPR139Q6DWJ6 353 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 CROCCP3Q8IVE0 287 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 RFLNBQ8N5W9 214 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 ASB15Q8WXK1 588 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 SPRY4Q9C004 299 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 CDCP1Q9H5V8 836 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 OCEL1Q9H607 264 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 TRIM36Q9NQ86 728 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 A3GALT2U3KPV4 340 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 SHISA8B8ZZ34 492 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 H7C1C5 153 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 RNF13O43567 381 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 MT-ND5P03915 603 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 RAB40ALP0C0E4 278 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 HCCSP53701 268 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 LCN6P62502 163 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 SSX6Q7RTT6 188 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 S100ZQ8WXG8 99 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 C4orf36Q96KX1 117 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 TSSK2Q96PF2 358 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 TMED9Q9BVK6 235 aa23.21■■□□□ 1.31
CLK2-201ENST00000355560 NXF2Q9GZY0 626 aaKnown RBP23.21■■□□□ 1.31
CLK2-201ENST00000355560 ZNF346Q9UL40 294 aaKnown RBP23.21■■□□□ 1.31
CLK2-201ENST00000355560 ETV2O00321 342 aaPredicted RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 RPS19P39019 145 aaKnown RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 FABP5Q01469 135 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 ZNF846Q147U1 533 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 PLPPR5Q32ZL2 321 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 VASNQ6EMK4 673 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 ZNF417Q8TAU3 575 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 ARL5BQ96KC2 179 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 ZNF587Q96SQ5 575 aaPredicted RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 TTTY10Q9BZA0 68 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 WDR12Q9GZL7 423 aaKnown RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 CPNE5Q9HCH3 593 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 INIPQ9NRY2 104 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 FBXL2Q9UKC9 423 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 ZMIZ1Q9ULJ6 1067 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 FARSAQ9Y285 508 aaKnown RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 PCDHGA1Q9Y5H4 931 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 FAM171A2A8MVW0 826 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 GLCEO94923 617 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 PLGP00747 810 aaPredicted RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 PYCR1P32322 319 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 SSR4P51571 173 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 SLC25A1P53007 311 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 EIF3IQ13347 325 aaKnown RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 HES3Q5TGS1 186 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 TMEM164Q5U3C3 297 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 CD200R1LQ6Q8B3 271 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 LYPD4Q6UWN0 246 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 RPS19BP1Q86WX3 136 aaKnown RBP23.2■■□□□ 1.3
CLK2-201ENST00000355560 GPALPP1Q8IXQ4 340 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 SLC35F2Q8IXU6 374 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 MRGPRX4Q96LA9 322 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 ALG12Q9BV10 488 aa23.2■■□□□ 1.3
CLK2-201ENST00000355560 PCDHGB7Q9Y5F8 929 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms