RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TOR1AIP2Q8NFQ8 470 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 OR52L1Q8NGH7 329 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 PCNPQ8WW12 178 aaKnown RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 HS6ST2Q96MM7 605 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 OR2M2Q96R28 347 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 OCIAD1Q9NX40 245 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 AUP1Q9Y679 476 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 MUC6Q6W4X9 2439 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SLC22A31A6NKX4 558 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 DUXAA6NLW8 204 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SCO1O75880 301 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CBX7O95931 251 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SBK2P0C263 348 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SNRPBP14678 240 aaKnown RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ATF1P18846 271 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CD53P19397 219 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 RAB3BP20337 219 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 M6PRP20645 277 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF10P21506 573 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SSTR2P30874 369 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 MMP15P51511 669 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CAMK2DQ13557 499 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 FGFBP1Q14512 234 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 DUSP5Q16690 384 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ST3GAL2Q16842 350 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ACSM3Q53FZ2 586 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 TCTE1Q5JU00 501 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 LCN10Q6JVE6 187 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SSX6Q7RTT6 188 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 GPALPP1Q8IXQ4 340 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF321PQ8N8H1 164 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 OR5J2Q8NH18 312 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 HAVCR2Q8TDQ0 301 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 TMEM239Q8WW34 195 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 GHSRQ92847 366 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CCDC74BQ96LY2 380 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SORCS2Q96PQ0 1159 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CACNG6Q9BXT2 260 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ADGRL4Q9HBW9 690 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 KRCC1Q9NPI7 259 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CMC2Q9NRP2 79 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CNOT1A5YKK6 2376 aaKnown RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CIB4A0PJX0 185 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 TRAPPC13A5PLN9 417 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 CDHR4A6H8M9 788 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 B8ZZF3 427 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PRR23D1E9PI22 279 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 GPR171O14626 319 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 UBL3O95164 117 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 CER1O95813 267 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PDGFAP04085 211 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 GYPBP06028 91 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PRR23D2P0DMB1 279 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 RNH1P13489 461 aaKnown RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 NT5EP21589 574 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PYCR1P32322 319 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 IKZF1Q13422 519 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 GRM7Q14831 915 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 POU4F3Q15319 338 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 ARHGAP11BQ3KRB8 267 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 EXOSC6Q5RKV6 272 aaKnown RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 GARNL3Q5VVW2 1013 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 HACD4Q5VWC8 232 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 DMKNQ6E0U4 476 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PWWP2BQ6NUJ5 590 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 IDO2Q6ZQW0 420 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PRSS45Q7RTY3 260 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 GLRX5Q86SX6 157 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SLITRK4Q8IW52 837 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 RFLNBQ8N5W9 214 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 CYB561A3Q8NBI2 242 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 OR13C2Q8NGS9 318 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 GIMAP1Q8WWP7 306 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 HGDQ93099 445 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 TSLPQ969D9 159 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MARVELD3Q96A59 401 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 CCDC120Q96HB5 630 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MS4A4EQ96PG1 132 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 OR6C1Q96RD1 312 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SDF2Q99470 211 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 IFT27Q9BW83 186 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 TTTY10Q9BZA0 68 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 ADAP2Q9NPF8 381 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 INPP5EQ9NRR6 644 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 KCNN3Q9UGI6 736 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 C19orf53Q9UNZ5 99 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 ZFHX2Q9C0A1 2572 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 TRAV27A0A087WT01 109 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 A0A1W2PRG6 482 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PMS2P1A4D2B8 440 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MAGEB4O15481 346 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MPC2O95563 127 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MT-ND4P03905 459 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SLC2A5P22732 501 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MAP3K8P41279 467 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 ARL4DP49703 201 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 HCCSP53701 268 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 IGLV3-21P80748 117 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SNTA1Q13424 505 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms